RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 RD3Q7Z3Z2 195 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 CLEC14AQ86T13 490 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 TBC1D1Q86TI0 1168 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-216ENST00000493864 LRRTM4Q86VH4 590 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 TRAPPC5Q8IUR0 188 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 VRK3Q8IV63 474 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 CPNE9Q8IYJ1 553 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 CFAP206Q8IYR0 622 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 SLC22A18ASQ8N1D0 253 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 ZBTB2Q8N680 514 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 OR56A4Q8NGH8 313 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 DENND1AQ8TEH3 1009 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 ELMO1Q92556 727 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 GCDHQ92947 438 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-216ENST00000493864 ZNF514Q96K75 400 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-216ENST00000493864 CABS1Q96KC9 395 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 UBXN10Q96LJ8 280 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 SMC6Q96SB8 1091 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 PRRX2Q99811 253 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 POPDC3Q9HBV1 291 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 SYTL2Q9HCH5 934 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 SPATS2LQ9NUQ6 558 aaKnown RBP6.39□□□□□ -1.39
TRA2B-216ENST00000493864 ZSCAN32Q9NX65 697 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 TMEM216Q9P0N5 145 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 SENP1Q9P0U3 644 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-216ENST00000493864 KLHL42Q9P2K6 505 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 SLC17A7Q9P2U7 560 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 DCDC2Q9UHG0 476 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 IKZF3Q9UKT9 509 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 EMCNQ9ULC0 261 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 SUFUQ9UMX1 484 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 GPR34Q9UPC5 381 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 ANKRD6Q9Y2G4 727 aa6.39□□□□□ -1.39
TRA2B-216ENST00000493864 TNRC6BQ9UPQ9 1833 aaKnown RBP6.39□□□□□ -1.39
TRA2B-216ENST00000493864 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 TP53BP1Q12888 1972 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 TDRD6O60522 2096 aaKnown RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 ANKRD12Q6UB98 2062 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 SPTY2D1-AS1A0A0U1RR47 76 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 SLC5A10A0PJK1 596 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 TMEM120BA0PK00 339 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 MGAT4DA6NG13 374 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 F8W8V4 182 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 TLR4O00206 839 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 CDC7O00311 574 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 QSOX1O00391 747 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 TOR1BO14657 336 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 KPNA5O15131 536 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 KMOO15229 486 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 POLR3GO15318 223 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 PRPF4O43172 522 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 ZBTB14O43829 449 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 MAGEC1O60732 1142 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 GPC4O75487 556 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 SEC24DO94855 1032 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 KLHL2O95198 593 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 APOA4P06727 396 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 GSTA1P08263 222 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 INHBBP09529 407 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 LTA4HP09960 611 aaKnown RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 ZNF37AP17032 561 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 KELP23276 732 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 DGKAP23743 735 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 CCND1P24385 295 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 HTR1BP28222 390 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 OAS2P29728 719 aaKnown RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 PDHA2P29803 388 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 SLC26A3P40879 764 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 GNPDA1P46926 289 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 CCT5P48643 541 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 SRP54P61011 504 aaKnown RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 IRX4P78413 519 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 ARHGAP8P85298 464 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 HSPA14Q0VDF9 509 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 ABRQ12979 859 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 BOP1Q14137 746 aaKnown RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 CSHL1Q14406 222 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 NFE2L1Q14494 772 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 GBX1Q14549 363 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 INSCQ1MX18 579 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 MUM1Q2TAK8 710 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 PRAMEF14Q5SWL7 426 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 PLEKHS1Q5SXH7 462 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 N4BP2L1Q5TBK1 243 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 LYSMD4Q5XG99 296 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 PMS2CLQ68D20 193 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 CHST15Q7LFX5 561 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 ASCL5Q7RTU5 278 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 OTOAQ7RTW8 1153 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 PIWIL4Q7Z3Z4 852 aaKnown RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 AMZ2Q86W34 360 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 GALNT13Q8IUC8 556 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 GLB1L2Q8IW92 636 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 CNPY4Q8N129 248 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 NKAPQ8N5F7 415 aaKnown RBP6.38□□□□□ -1.39
TRA2B-216ENST00000493864 ANKRD42Q8N9B4 389 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 ZBTB44Q8NCP5 570 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 OR2L2Q8NH16 312 aa6.38□□□□□ -1.39
TRA2B-216ENST00000493864 MGARPQ8TDB4 240 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms