RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SLC12A1Q13621 1099 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 MXD4Q14582 209 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 STK38Q15208 465 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 USP41Q3LFD5 358 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 FAM78AQ5JUQ0 283 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 HYIQ5T013 277 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 KRT79Q5XKE5 535 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 WSCD1Q658N2 575 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 HAUS3Q68CZ6 603 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 SPOPLQ6IQ16 392 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 DUS1LQ6P1R4 473 aaKnown RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 FAM171BQ6P995 826 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 VITQ6UXI7 678 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 ALKAL1Q6UXT8 129 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM184AQ6ZMB5 413 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TPRG1Q6ZUI0 275 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 STXBP4Q6ZWJ1 553 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 CACUL1Q86Y37 369 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TDRPQ86YL5 185 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 DHX40Q8IX18 779 aaKnown RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 CTAGE4Q8IX94 777 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 MAML2Q8IZL2 1156 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 PLD5Q8N7P1 536 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 FRMD1Q8N878 549 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 KIAA0895Q8NCT3 520 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 ERMNQ8TAM6 284 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 LRR1Q96L50 414 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 IFT74Q96LB3 600 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 ZSCAN31Q96LW9 406 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 QRFPRQ96P65 431 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 SEPT5Q99719 369 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 ASCL2Q99929 193 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 MRPL45Q9BRJ2 306 aaKnown RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 PYM1Q9BRP8 204 aaKnown RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 FAM213AQ9BRX8 229 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 PI4K2AQ9BTU6 479 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 CCDC94Q9BW85 323 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 PLEKHA4Q9H4M7 779 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TFB2MQ9H5Q4 396 aaKnown RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 GTSE1Q9NYZ3 720 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 ZNF624Q9P2J8 865 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 POLG2Q9UHN1 485 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TBX20Q9UMR3 447 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 ERVK-11Q9UQG0 969 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 ZNF292O60281 2723 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 VPS13AQ96RL7 3174 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 SCN2AQ99250 2005 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 SF3B1O75533 1304 aaKnown RBP eCLIP2.94□□□□□ -1.94
PTCD3-218ENST00000493430 PIEZO1Q92508 2521 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 DMDP11532 3685 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 MED19A0JLT2 244 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-218ENST00000493430 CCDC189A1A4V9 331 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 MYBPHLA2RUH7 354 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TRIM49BA6NDI0 452 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 NR5A2O00482 541 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 PRRG1O14668 218 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TGFB1I1O43294 461 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 STX6O43752 255 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 KLRC4O43908 158 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 DKC1O60832 514 aaKnown RBP eCLIP2.94□□□□□ -1.94
PTCD3-218ENST00000493430 GUCY1B2O75343 617 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TBCAO75347 108 aaKnown RBP2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TACC1O75410 805 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 IGLV1-44P01699 117 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 KRT19P08727 400 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 MCF2P10911 925 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 LAMP2P13473 410 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 CCDC130P13994 396 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 CYP2F1P24903 491 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 LMO2P25791 158 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 GABRR2P28476 465 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 GDI1P31150 447 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 PRPHP41219 470 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 UBA7P41226 1012 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 MTHFRP42898 656 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 LUMP51884 338 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-218ENST00000493430 CDH8P55286 799 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 ARL4CP56559 192 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 GNB1P62873 340 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 ASIC1P78348 528 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 FOXD4Q12950 439 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-218ENST00000493430 GRIK2Q13002 908 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TDGQ13569 410 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM132DQ14C87 1099 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 ANGPT1Q15389 498 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 DCAF4L1Q3SXM0 396 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 SLC39A12Q504Y0 691 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 RILPL1Q5EBL4 403 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 XKR4Q5GH76 650 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 C10orf62Q5T681 223 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-218ENST00000493430 LIN9Q5TKA1 542 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 ADALQ6DHV7 355 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 OR7E24Q6IFN5 339 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TCEAL6Q6IPX3 200 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM81Q6P7N7 255 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 C15orf39Q6ZRI6 1047 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM150AQ86TG1 271 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 GTSCR1Q86UQ5 136 aa2.94□□□□□ -1.94
PTCD3-218ENST00000493430 SUGP1Q8IWZ8 645 aaKnown RBP2.94□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM190Q8WZ59 177 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms