RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 DUPD1Q68J44 220 aa22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 LCTLQ6UWM7 567 aa22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 SPNS2Q8IVW8 549 aa22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 TGIF2Q9GZN2 237 aa22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 ZNF552Q9H707 407 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 MKKSQ9NPJ1 570 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 SLAMF7Q9NQ25 335 aa22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 C14orf105Q9NVL8 296 aa22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 ARL15Q9NXU5 204 aa22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 NOVA2Q9UNW9 492 aaKnown RBP22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 PLAAQ9Y263 795 aa22.52■■□□□ 1.2
CTDSP1-211ENST00000492545 PRRC2CQ9Y520 2896 aaKnown RBP22.52■■□□□ 1.19
CTDSP1-211ENST00000492545 EIF3HO15372 352 aaKnown RBP eCLIP22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 PHKG1Q16816 387 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 TUBB8Q3ZCM7 444 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 COLEC12Q5KU26 742 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 SHISA6Q6ZSJ9 500 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 STRA8Q7Z7C7 330 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 ZC3HC1Q86WB0 502 aaKnown RBP22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 DTWD1Q8N5C7 304 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 RBMXL3Q8N7X1 1067 aaKnown RBP22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 CPT1CQ8TCG5 803 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 PYROXD1Q8WU10 500 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 ATG10Q9H0Y0 220 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 SLC17A6Q9P2U8 582 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 TRPC4Q9UBN4 977 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 C3orf18Q9UK00 162 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 MAP4K5Q9Y4K4 846 aa22.51■■□□□ 1.19
CTDSP1-211ENST00000492545 NPPBP16860 134 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 AVPR1BP47901 424 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 CSNK1G2P78368 415 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 RAPSNQ13702 412 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 ATG9BQ674R7 924 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 CYS1Q717R9 158 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 TMEM151BQ8IW70 566 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 ZBED8Q8IZ13 594 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 NKAPQ8N5F7 415 aaKnown RBP22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 CAMKVQ8NCB2 501 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 OR11G2Q8NGC1 345 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 OR56A3Q8NH54 315 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 FBXL8Q96CD0 374 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 MMABQ96EY8 250 aaPredicted RBP22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 VPS39Q96JC1 886 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 OLFM1Q99784 485 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 SYNPO2LQ9H987 977 aa22.5■■□□□ 1.19
CTDSP1-211ENST00000492545 PCSK5Q92824 1860 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 TNRC6AQ8NDV7 1962 aaKnown RBP22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 H0YIG0 161 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 FOXS1O43638 330 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 VPS4BO75351 444 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 ACPPP15309 386 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 ITGA3P26006 1051 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 EMP2P54851 167 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 FASTKD3Q14CZ7 662 aaKnown RBP22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 SLC6A19Q695T7 634 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 ZADH2Q8N4Q0 377 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 GALNT11Q8NCW6 608 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 ABHD11Q8NFV4 315 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 YIPF2Q9BWQ6 316 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 VPS4AQ9UN37 437 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 B3GNT3Q9Y2A9 372 aa22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.49■■□□□ 1.19
CTDSP1-211ENST00000492545 MAP2K7O14733 419 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 HPP00738 406 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 CYC1P08574 325 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 ZNF37AP17032 561 aaPredicted RBP22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 CXCR2P25025 360 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 CAV1Q03135 178 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 VWA2Q5GFL6 755 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 AGAP7PQ5VUJ5 663 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 MBOAT1Q6ZNC8 495 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 PLD3Q8IV08 490 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 TBC1D19Q8N5T2 526 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 AMER3Q8N944 861 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 CDKL2Q92772 493 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 ALKBH8Q96BT7 664 aaKnown RBP22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 TM4SF19Q96DZ7 209 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 AGAP4Q96P64 663 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 SARGQ9BW04 601 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 LHPPQ9H008 270 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 RHOJQ9H4E5 214 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 POPDC3Q9HBV1 291 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 UTP11Q9Y3A2 253 aaKnown RBP22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 PSAT1Q9Y617 370 aa22.48■■□□□ 1.19
CTDSP1-211ENST00000492545 MDC1Q14676 2089 aaKnown RBP22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 A0A0A6YYC8 382 aaPredicted RBP22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 A0A1W2PQ72 361 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 I3L1I5 382 aaPredicted RBP22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 P2RX6O15547 441 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 NSA2O95478 260 aaKnown RBP22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 CCR8P51685 355 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 VN1R4Q7Z5H5 301 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 Q8NA96 180 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 OR4K1Q8NGD4 311 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 MFRPQ9BY79 579 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 PHACTR1Q9C0D0 580 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 LRRK2Q5S007 2527 aa22.47■■□□□ 1.19
CTDSP1-211ENST00000492545 FAM95CA0A1B0GW59 222 aa22.46■■□□□ 1.19
CTDSP1-211ENST00000492545 IDSB3KWA1 339 aa22.46■■□□□ 1.19
CTDSP1-211ENST00000492545 RAD51CO43502 376 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms