RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 RPAP1Q9BWH6 1393 aaPredicted RBP3.09□□□□□ -1.92
PHC3-213ENST00000491258 ANKRD31Q8N7Z5 1873 aa3.09□□□□□ -1.92
PHC3-213ENST00000491258 GAPDHSO14556 408 aaPredicted RBP3.08□□□□□ -1.92
PHC3-213ENST00000491258 NDUFS4O43181 175 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 SURF6O75683 361 aaKnown RBP3.08□□□□□ -1.92
PHC3-213ENST00000491258 BAG3O95817 575 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 GH2P01242 217 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 CCL5P13501 91 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 XBP1P17861 261 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 LHCGRP22888 699 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 NMBRP28336 390 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 DHX8Q14562 1220 aaKnown RBP3.08□□□□□ -1.92
PHC3-213ENST00000491258 MDH1BQ5I0G3 518 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 CCDC158Q5M9N0 1113 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 NAA16Q6N069 864 aaPredicted RBP3.08□□□□□ -1.92
PHC3-213ENST00000491258 LINGO4Q6UY18 593 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 SLC25A42Q86VD7 318 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 TEX11Q8IYF3 940 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 ANKRD13CQ8N6S4 541 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 RAET1EQ8TD07 263 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 RNF128Q8TEB7 428 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 U2AF1L4Q8WU68 220 aaKnown RBP3.08□□□□□ -1.92
PHC3-213ENST00000491258 CHPT1Q8WUD6 406 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 PERPQ96FX8 193 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 FNBP1Q96RU3 617 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 ZNF577Q9BSK1 485 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 S1PR5Q9H228 398 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 DNAJC18Q9H819 358 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 MED20Q9H944 212 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 PIH1D3Q9NQM4 214 aaKnown RBP3.08□□□□□ -1.92
PHC3-213ENST00000491258 AGTPBP1Q9UPW5 1226 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 ZNF510Q9Y2H8 683 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 HCFC1P51610 2035 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 RFX7Q2KHR2 1363 aa3.08□□□□□ -1.92
PHC3-213ENST00000491258 SIPA1L3O60292 1781 aaPredicted RBP3.07□□□□□ -1.92
PHC3-213ENST00000491258 ARFGEF1Q9Y6D6 1849 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 C19orf81C9J6K1 198 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 THEGLP0DJG4 465 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 ACTN1P12814 892 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 PDX1P52945 283 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 HMGCS2P54868 508 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 BACE1P56817 501 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 DYNLL1P63167 89 aaKnown RBP3.07□□□□□ -1.92
PHC3-213ENST00000491258 UBXN2AP68543 259 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 PNRC1Q12796 327 aaPredicted RBP3.07□□□□□ -1.92
PHC3-213ENST00000491258 SHROOM1Q2M3G4 852 aaPredicted RBP3.07□□□□□ -1.92
PHC3-213ENST00000491258 C20orf194Q5TEA3 1177 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 TATDN1Q6P1N9 297 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 TMED8Q6PL24 325 aaPredicted RBP3.07□□□□□ -1.92
PHC3-213ENST00000491258 HEATR4Q86WZ0 1026 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 ITPRIPQ8IWB1 547 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 ARHGAP12Q8IWW6 846 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 CPXCR1Q8N123 301 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 GPD1LQ8N335 351 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 ESX1Q8N693 406 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 PPFIBP2Q8ND30 876 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 MYRIPQ8NFW9 859 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 MAPK15Q8TD08 544 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 KCNG4Q8TDN1 519 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 ELMOD3Q96FG2 381 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 NECTIN4Q96NY8 510 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 MAN2C1Q9NTJ4 1040 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 NDE1Q9NXR1 346 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 AATFQ9NY61 560 aaKnown RBP eCLIP3.07□□□□□ -1.92
PHC3-213ENST00000491258 OR6C2Q9NZP2 312 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 MORF4L1Q9UBU8 362 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 PPP2R2CQ9Y2T4 447 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.07□□□□□ -1.923e-6■□□□□ 11.1
PHC3-213ENST00000491258 LYVE1Q9Y5Y7 322 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 BCORQ6W2J9 1755 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 KDM3BQ7LBC6 1761 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 FER1L6Q2WGJ9 1857 aa3.07□□□□□ -1.92
PHC3-213ENST00000491258 EYSQ5T1H1 3165 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 PI4K2BG5E9Z4 385 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 GPRIN2O60269 458 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 IDH1O75874 414 aaKnown RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 ASNSP08243 561 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 HOXD4P09016 255 aaPredicted RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 TMEM11P17152 192 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 BCL3P20749 454 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 BRCA1P38398 1863 aaKnown RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 ZFP36L2P47974 494 aaKnown RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 AFDNP55196 1824 aaKnown RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 ZRSR2Q15696 482 aaKnown RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 INTS11Q5TA45 600 aaKnown RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 GRTP1Q5TC63 336 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 TMEM207Q6UWW9 146 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 RAPH1Q70E73 1250 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 AACSQ86V21 672 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 CERS3Q8IU89 383 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 FAM114A1Q8IWE2 563 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 RPAP2Q8IXW5 612 aaPredicted RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 USP6NLQ92738 828 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 MOAP1Q96BY2 351 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 CNOT6LQ96LI5 555 aaKnown RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 DEFB118Q96PH6 123 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 RIOK1Q9BRS2 568 aaKnown RBP3.06□□□□□ -1.92
PHC3-213ENST00000491258 NUP85Q9BW27 656 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 ARRDC1-AS1Q9H2J1 176 aa3.06□□□□□ -1.92
PHC3-213ENST00000491258 PRO3102Q9H379 93 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms