RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 SOCS4Q8WXH5 440 aa10.8□□□□□ -0.68
VPS72-205ENST00000491094 TCF25Q9BQ70 676 aa10.8□□□□□ -0.68
VPS72-205ENST00000491094 NUAK2Q9H093 628 aa10.8□□□□□ -0.68
VPS72-205ENST00000491094 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS72-205ENST00000491094 NECTIN3Q9NQS3 549 aa10.8□□□□□ -0.68
VPS72-205ENST00000491094 SLC6A14Q9UN76 642 aa10.8□□□□□ -0.68
VPS72-205ENST00000491094 ZSWIM8A7E2V4 1837 aa10.8□□□□□ -0.68
VPS72-205ENST00000491094 WNT9AO14904 365 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 EOMESO95936 686 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 TGM1P22735 817 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 CTSKP43235 329 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 PPP5CP53041 499 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 SMARCB1Q12824 385 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ZXDCQ2QGD7 858 aaPredicted RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 TRIM60Q495X7 471 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ARMCX4Q5H9R4 360 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ATAD3BQ5T9A4 648 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 RETSATQ6NUM9 610 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 C17orf99Q6UX52 265 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 ENTHD1Q8IYW4 607 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 C1orf52Q8N6N3 182 aaKnown RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 CORO1BQ9BR76 489 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 CENPOQ9BU64 300 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ITPAQ9BY32 194 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 SLIRPQ9GZT3 109 aaKnown RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 LOC285556D6RIA3 1793 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 TRIM64BA6NI03 449 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 CTDSP2O14595 271 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 YY2O15391 372 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 PCDH7O60245 1069 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ANXA4P09525 319 aaPredicted RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 SLC19A1P41440 591 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 CTSOP43234 321 aaPredicted RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 DUOXA1Q1HG43 343 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 PLEKHG6Q3KR16 790 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ZNF362Q5T0B9 420 aaPredicted RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 TRIM46Q7Z4K8 759 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ZSWIM9Q86XI8 627 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 DNMT3BQ9UBC3 853 aaKnown RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 RAB23Q9ULC3 237 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 GREB1Q4ZG55 1949 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 TTC36A6NLP5 189 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 M0QX08 132 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 GFRA2O00451 464 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 SSX4O60224 188 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 PRAMEF4O60810 478 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 WBP4O75554 376 aaKnown RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 PRPS2P11908 318 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 CYBAP13498 195 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ETFAP13804 333 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 GRK5P34947 590 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 NRIP1P48552 1158 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 MRPS15P82914 257 aaKnown RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 ST3GAL4Q11206 333 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 PRAMEF9Q5VWM5 478 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 KDM4DQ6B0I6 523 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 LILRA3Q8N6C8 439 aaPredicted RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 CELF2-AS1Q8N7Q2 184 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 ATL1Q8WXF7 558 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 SLC38A4Q969I6 547 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 YIPF6Q96EC8 236 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 CEP44Q9C0F1 390 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 KCTD5Q9NXV2 234 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 EHD3Q9NZN3 535 aa10.79□□□□□ -0.68
VPS72-205ENST00000491094 HECAQ9UBI9 543 aaPredicted RBP10.79□□□□□ -0.68
VPS72-205ENST00000491094 GAPDHSO14556 408 aaPredicted RBP10.78□□□□□ -0.68
VPS72-205ENST00000491094 CKMT1AP12532 417 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 EPORP19235 508 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 FEN1P39748 380 aaKnown RBP10.78□□□□□ -0.68
VPS72-205ENST00000491094 PREPP48147 710 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 MEF2AQ02078 507 aaPredicted RBP10.78□□□□□ -0.68
VPS72-205ENST00000491094 UGT8Q16880 541 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 SYT6Q5T7P8 510 aaPredicted RBP10.78□□□□□ -0.68
VPS72-205ENST00000491094 CCBE1Q6UXH8 406 aaPredicted RBP10.78□□□□□ -0.68
VPS72-205ENST00000491094 TSPYL5Q86VY4 417 aaPredicted RBP10.78□□□□□ -0.68
VPS72-205ENST00000491094 AMER2Q8N7J2 671 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 BCL7CQ8WUZ0 217 aaPredicted RBP10.78□□□□□ -0.68
VPS72-205ENST00000491094 PDLIM5Q96HC4 596 aaKnown RBP10.78□□□□□ -0.68
VPS72-205ENST00000491094 DUSP26Q9BV47 211 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 NTMT1Q9BV86 223 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 ADPRHL2Q9NX46 363 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 MARCH5Q9NX47 278 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 TRPS1Q9UHF7 1281 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 DOCK4Q8N1I0 1966 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 FAM227AF5H4B4 570 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 CCNKO75909 580 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 KRT8P05787 483 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 GALTP07902 379 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 ALOX5P09917 674 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 CYP4F8P98187 520 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 CPTPQ5TA50 214 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 CST9Q5W186 159 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 ALG1LQ6GMV1 187 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 ZNF852Q6ZMS4 543 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 TAGAPQ8N103 731 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 SCLYQ96I15 445 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 NDEL1Q9GZM8 345 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 TRIM39Q9HCM9 518 aa10.78□□□□□ -0.68
VPS72-205ENST00000491094 DNAJC11Q9NVH1 559 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms