RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 SHCBP1LQ9BZQ2 653 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 RHBGQ9H310 441 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 ABCF3Q9NUQ8 709 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 PSD3Q9NYI0 1048 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 ADGRE2Q9UHX3 823 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 SNX6Q9UNH7 406 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 BTRCQ9Y297 605 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 PCDHGA1Q9Y5H4 931 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 DNAJC15Q9Y5T4 150 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 MDC1Q14676 2089 aaKnown RBP12.83□□□□□ -0.36
TRAIP-210ENST00000489948 TMEM233B4DJY2 109 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 D6RAR5 112 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 NPIPB8E9PQR5 432 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 H7BY64 318 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 ZNF195O14628 629 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 GDF9O60383 454 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 CRCPO75575 148 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 RPLP0P05388 317 aaKnown RBP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 MSL3P1P0C860 447 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 TROVE2P10155 538 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 HSD3B1P14060 373 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 DRD4P21917 467 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 CDH3P22223 829 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 HSD3B2P26439 372 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 HMOX2P30519 316 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 AHRP35869 848 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 PIK3CBP42338 1070 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 SCTRP47872 440 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 RPS15AP62244 130 aaKnown RBP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 ZRSR2Q15696 482 aaKnown RBP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 CPSF6Q16630 551 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 HIST2H2ACQ16777 129 aaPredicted RBP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 XKR7Q5GH72 579 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 NKAIN2Q5VXU1 208 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 FRG2Q64ET8 278 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 FCRL6Q6DN72 434 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 CLEC6AQ6EIG7 209 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 HIST2H2AA3Q6FI13 130 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 CGB2Q6NT52 195 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 FIGLAQ6QHK4 219 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 TMIGD1Q6UXZ0 262 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 Q8N9G6 341 aaPredicted RBP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 C19orf47Q8N9M1 422 aaKnown RBP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 OR7G3Q8NG95 312 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 METTL6Q8TCB7 284 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 NETO1Q8TDF5 533 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 TWIST2Q8WVJ9 160 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 NCSTNQ92542 709 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 THAP11Q96EK4 314 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 PRAP1Q96NZ9 151 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 TGM7Q96PF1 710 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 TRAPPC9Q96Q05 1148 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 FRG2BQ96QU4 278 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 TRIM55Q9BYV6 548 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 SPNS1Q9H2V7 528 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 ZNF768Q9H5H4 540 aaKnown RBP12.82□□□□□ -0.36
TRAIP-210ENST00000489948 BRF2Q9HAW0 419 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 PFDN4Q9NQP4 134 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 ENAMQ9NRM1 1142 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 PNPOQ9NVS9 261 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 PILRAQ9UKJ1 303 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 PCDHGA4Q9Y5G9 962 aa12.82□□□□□ -0.36
TRAIP-210ENST00000489948 TRPC5OSA6NMA1 111 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 FOXE1O00358 373 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 MANBAO00462 879 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 HAT1O14929 419 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 FAM107AO95990 144 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 THRAP10827 490 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 CDK4P11802 303 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 ST6GAL1P15907 406 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 SEC24CP53992 1094 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 PHEXP78562 749 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 CCL7P80098 99 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 CSTF3Q12996 717 aaKnown RBP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 IFT88Q13099 833 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 AMZ1Q400G9 498 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 MAVSQ7Z434 540 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 TRIM46Q7Z4K8 759 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 ADCK2Q7Z695 626 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 MYLK4Q86YV6 388 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 SLITRK4Q8IW52 837 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 FAM20CQ8IXL6 584 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 GBP7Q8N8V2 638 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 AGR3Q8TD06 166 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 KLHL6Q8WZ60 621 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 C19orf60Q96EN9 201 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 TCTN2Q96GX1 697 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 SLC41A2Q96JW4 573 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 MAELQ96JY0 434 aaKnown RBP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 MAP3K3Q99759 626 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 ZFYVE21Q9BQ24 234 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 NUDT22Q9BRQ3 303 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 ELOVL6Q9H5J4 265 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 MEAF6Q9HAF1 191 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 KLHL14Q9P2G3 628 aa12.81□□□□□ -0.36
TRAIP-210ENST00000489948 MARCOQ9UEW3 520 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 ZNF490Q9ULM2 529 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-210ENST00000489948 USH1CQ9Y6N9 552 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms