RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 VN1R4Q7Z5H5 301 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 STRA8Q7Z7C7 330 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 GALNT7Q86SF2 657 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 ARHGEF39Q8N4T4 335 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 AMER3Q8N944 861 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 OR11G2Q8NGC1 345 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 LRRC39Q96DD0 335 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 SEMA3GQ9NS98 782 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 ARL15Q9NXU5 204 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 UTP6Q9NYH9 597 aaKnown RBP13.33□□□□□ -0.28
VTI1A-206ENST00000489142 ZFATQ9P243 1243 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 C3orf18Q9UK00 162 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 NXT1Q9UKK6 140 aaKnown RBP13.33□□□□□ -0.28
VTI1A-206ENST00000489142 PCDHGB7Q9Y5F8 929 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 HECTD1Q9ULT8 2610 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 DOPEY2Q9Y3R5 2298 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 SCN2AQ99250 2005 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 NPEPPSL1A6NEC2 478 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 SLC16A5O15375 505 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 FOXS1O43638 330 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 IGHEP01854 428 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 ANXA5P08758 320 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 GNLYP22749 145 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 BCL6P41182 706 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 CSNK1G2P78368 415 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 EEF1A2Q05639 463 aaKnown RBP13.32□□□□□ -0.28
VTI1A-206ENST00000489142 MGAT5Q09328 741 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 Q0VFX4 171 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 AIMP2Q13155 320 aaKnown RBP13.32□□□□□ -0.28
VTI1A-206ENST00000489142 DSG2Q14126 1118 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 TUBB8Q3ZCM7 444 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 PLEKHN1Q494U1 663 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-206ENST00000489142 SYT10Q6XYQ8 523 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 OR9A4Q8NGU2 314 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 ZCCHC10Q8TBK6 192 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 UNKQ9C0B0 810 aaKnown RBP13.32□□□□□ -0.28
VTI1A-206ENST00000489142 DRC3Q9H069 523 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 ZNF160Q9HCG1 818 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 SLAMF7Q9NQ25 335 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 SMYD2Q9NRG4 433 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 TMEM184CQ9NVA4 438 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 CSAG2Q9Y5P2 127 aa13.32□□□□□ -0.28
VTI1A-206ENST00000489142 FAM95CA0A1B0GW59 222 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 E7ESA3 106 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 CDC7O00311 574 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 LCMT2O60294 686 aaKnown RBP13.31□□□□□ -0.28
VTI1A-206ENST00000489142 JRKO75564 520 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 ALPPP05187 535 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 HIST1H2AGP0C0S8 130 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-206ENST00000489142 ACPPP15309 386 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 HIST1H2ADP20671 130 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 CASQ1P31415 396 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 SLC26A3P40879 764 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 EFNA3P52797 238 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 EMP3P54852 163 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 RPS15AP62244 130 aaKnown RBP13.31□□□□□ -0.28
VTI1A-206ENST00000489142 SRSF1Q07955 248 aaKnown RBP eCLIP13.31□□□□□ -0.28
VTI1A-206ENST00000489142 INPP5JQ15735 1006 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-206ENST00000489142 ZC3HC1Q86WB0 502 aaKnown RBP13.31□□□□□ -0.28
VTI1A-206ENST00000489142 ATCAYQ86WG3 371 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 C17orf64Q86WR6 236 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 SPATA4Q8NEY3 305 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 PNPLA2Q96AD5 504 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 C19orf60Q96EN9 201 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 THOC3Q96J01 351 aaKnown RBP13.31□□□□□ -0.28
VTI1A-206ENST00000489142 HIST1H2AHQ96KK5 128 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 TSNARE1Q96NA8 513 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 HIST1H2AJQ99878 128 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 H2AFJQ9BTM1 129 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 SGPP1Q9BX95 441 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 SAYSD1Q9NPB0 183 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 MOCS1Q9NZB8 636 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 HCN3Q9P1Z3 774 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 RNF14Q9UBS8 474 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 CDC14AQ9UNH5 594 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 MAP4K5Q9Y4K4 846 aa13.31□□□□□ -0.28
VTI1A-206ENST00000489142 IGLV3-12A0A075B6K2 115 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 PABPN1LA6NDY0 278 aaKnown RBP13.3□□□□□ -0.28
VTI1A-206ENST00000489142 CXorf49A8MYA2 514 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-206ENST00000489142 IDSB3KWA1 339 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 MAP2K7O14733 419 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 HEXBP07686 556 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 CELA2AP08217 269 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 NPPBP16860 134 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 ZNF37AP17032 561 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-206ENST00000489142 IL1RNP18510 177 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 SSTR1P30872 391 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 EMP2P54851 167 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 TAS2R39P59534 338 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 FRG1Q14331 258 aaKnown RBP13.3□□□□□ -0.28
VTI1A-206ENST00000489142 GARNL3Q5VVW2 1013 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 CAPN13Q6MZZ7 669 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-206ENST00000489142 LCTLQ6UWM7 567 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 SBSNQ6UWP8 590 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 CEP97Q8IW35 865 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 ZC3H7AQ8IWR0 971 aaKnown RBP13.3□□□□□ -0.28
VTI1A-206ENST00000489142 KCT2Q8NC54 265 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms