RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 DNMBPQ6XZF7 1577 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 STK36Q9NRP7 1315 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 SYNRGQ9UMZ2 1314 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 CDC42BPAQ5VT25 1732 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 LOC101059948A0A1B0GTJ6 334 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 A0A1W2PN81 502 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ARHGEF37A1IGU5 675 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 NEMP2A6NFY4 417 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ANXA2P2A6NMY6 339 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 PI4K2BG5E9Z4 385 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF197O14709 1029 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 SLC22A2O15244 555 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 SOCS5O75159 536 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ERLIN1O75477 346 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ACSL3O95573 720 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ATP5BP06576 529 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 FAM200BP0CF97 657 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 PRSS56P0CW18 603 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 EFNA1P20827 205 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 CA4P22748 312 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 MPZP25189 248 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 PSMA3P25788 255 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ITGA3P26006 1051 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 HOXC8P31273 242 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 CTNNA1P35221 906 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 CHRNA7P36544 502 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 PEX19P40855 299 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ACSM1Q08AH1 577 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF415Q09FC8 603 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 IFFO1Q0D2I5 559 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 HYAL1Q12794 435 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 GPR17Q13304 367 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 PPIGQ13427 754 aaKnown RBP eCLIP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF273Q14593 569 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 RRS1Q15050 365 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ODF4Q2M2E3 257 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ITPRIPL2Q3MIP1 535 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 GTDC1Q4AE62 458 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 SYT14P1Q58G82 188 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 OTUD3Q5T2D3 398 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 GFI1BQ5VTD9 330 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 TTC19Q6DKK2 380 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF449Q6P9G9 518 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 C15orf39Q6ZRI6 1047 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 C11orf57Q6ZUT1 292 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 NUP54Q7Z3B4 507 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 RTN4RL2Q86UN3 420 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 NUDT13Q86X67 352 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 IQCA1Q86XH1 822 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 KLHDC8BQ8IXV7 354 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF843Q8N446 348 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 MSANTD4Q8NCY6 345 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 OR8K1Q8NGG5 319 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 MIPOL1Q8TD10 442 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 N4BP2L2Q92802 583 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 EXT2Q93063 718 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ATP6V1E2Q96A05 226 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 SPSB1Q96BD6 273 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF501Q96CX3 271 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 VMP1Q96GC9 406 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF558Q96NG5 402 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 DUX3Q96PT4 197 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 F2RL3Q96RI0 385 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 CITED2Q99967 270 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 MGME1Q9BQP7 344 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 LZTS2Q9BRK4 669 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 FSD1Q9BTV5 496 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 LAT2Q9GZY6 243 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 IQCGQ9H095 443 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 TRPV5Q9NQA5 729 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 PDRG1Q9NUG6 133 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 FLRT3Q9NZU0 649 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 LRWD1Q9UFC0 647 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 BLOC1S6Q9UL45 172 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ODF2LQ9ULJ1 636 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 TMED3Q9Y3Q3 217 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 FANCAO15360 1455 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 CUL7Q14999 1698 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 PPRC1Q5VV67 1664 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 FAM135BQ49AJ0 1406 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ADGRB2O60241 1585 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 IQGAP2Q13576 1575 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 ABCC11Q96J66 1382 aa3.51□□□□□ -1.85
ECHDC1-217ENST00000488087 LRRIQ1Q96JM4 1722 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 MAGI2Q86UL8 1455 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 NRXN1Q9ULB1 1477 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 A0A087WV48 116 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 ERICH2A1L162 156 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 GTPBP10A4D1E9 387 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 H3BQF6 201 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 PTGESO14684 152 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 ATP6V0E1O15342 81 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 NGFP01138 241 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 PENKP01210 267 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 IGHV2-70P01814 119 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 AMBPP02760 352 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 EDN1P05305 212 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 OR52Z1P0C646 297 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 ERVK-10P10266 1014 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 SAGP10523 405 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms