RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 PDE10AQ9Y233 779 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 DIDO1Q9BTC0 2240 aaKnown RBP10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 A0A0A6YYC8 382 aaPredicted RBP10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 IDSB3KWA1 339 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 I3L1I5 382 aaPredicted RBP10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 E2F3O00716 465 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZBTB14O43829 449 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 AHSGP02765 367 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 C8GP07360 202 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 FDXRP22570 491 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CARSP49589 748 aaKnown RBP10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 OCA2Q04671 838 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 MORF4L2Q15014 288 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 NR6A1Q15406 480 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SYT16Q17RD7 645 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 BBS9Q3SYG4 887 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 THEMIS2Q5TEJ8 643 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 GARNL3Q5VVW2 1013 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ATG9BQ674R7 924 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 LRRC8EQ6NSJ5 796 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 HIBCHQ6NVY1 386 aaPredicted RBP10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PAQR3Q6TCH7 311 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 KIAA0408Q6ZU52 694 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ADCK2Q7Z695 626 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CREG2Q8IUH2 290 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 AMER2Q8N7J2 671 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TM9SF4Q92544 642 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 RERGQ96A58 199 aaPredicted RBP10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 LINGO1Q96FE5 620 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PDLIM2Q96JY6 352 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CAPZA3Q96KX2 299 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 OLFM1Q99784 485 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 NAT9Q9BTE0 207 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SGPP1Q9BX95 441 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SLC29A3Q9BZD2 475 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TGIF2Q9GZN2 237 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 LHPPQ9H008 270 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZNF160Q9HCG1 818 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 C14orf105Q9NVL8 296 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TRPC4Q9UBN4 977 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 IKZF3Q9UKT9 509 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TEX264Q9Y6I9 313 aa10.65□□□□□ -0.7
RAB11FIP3-210ENST00000487899 LOC102723996A0A087X1L8 192 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 IGHV1-45A0A0A0MS14 117 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 H7BY64 318 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 TTI1O43156 1089 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PRPF4O43172 522 aaKnown RBP eCLIP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 KLHL41O60662 606 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 SEC31AO94979 1220 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 AGFG2O95081 481 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 CELA2AP08217 269 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 GP1BBP13224 206 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 SOX11P35716 441 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 BCL6P41182 706 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 ELK3P41970 407 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 CSNK1G2P78368 415 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 MAT1AQ00266 395 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 EEF1A2Q05639 463 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 FAM53BQ14153 422 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 FASTKD3Q14CZ7 662 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PCOLCEQ15113 449 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 HP1BP3Q5SSJ5 553 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 AGTRAPQ6RW13 159 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 SBSNQ6UWP8 590 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PARP9Q8IXQ6 854 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 CISD2Q8N5K1 135 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PSMF1Q92530 271 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 MMABQ96EY8 250 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 CFAP36Q96G28 342 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 THOC3Q96J01 351 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PRAP1Q96NZ9 151 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PARVBQ9HBI1 364 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 MKKSQ9NPJ1 570 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 TAS2R13Q9NYV9 303 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PYCARDQ9ULZ3 195 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PSAT1Q9Y617 370 aa10.64□□□□□ -0.71
RAB11FIP3-210ENST00000487899 KCNE1BA0A087WTH5 132 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 JRKO75564 520 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 KLHL18O94889 574 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 CBX6O95503 412 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PRR35P0CG20 571 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 CDH1P12830 882 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 ZNF37AP17032 561 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 TSFMP43897 325 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 RGS4P49798 205 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 ITGA8P53708 1063 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 RPS15AP62244 130 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 DR1Q01658 176 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 MFAP5Q13361 173 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PPP1R3AQ16821 1122 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 TEDDM1Q5T9Z0 273 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 FHL5Q5TD97 284 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 HECTD2Q5U5R9 776 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 AGAP7PQ5VUJ5 663 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 TMEM214Q6NUQ4 689 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 TMEM205Q6UW68 189 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 SYDE1Q6ZW31 735 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PCGF5Q86SE9 256 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 PDSS2Q86YH6 399 aa10.63□□□□□ -0.71
RAB11FIP3-210ENST00000487899 KLHL7Q8IXQ5 586 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms