RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ANXA5P08758 320 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 RPS3P23396 243 aaKnown RBP eCLIP14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ADRA1DP25100 572 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 CCNFP41002 786 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 FAM53BQ14153 422 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 NAA25Q14CX7 972 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ZNF468Q5VIY5 522 aaPredicted RBP14.48□□□□□ -0.09
MCF2L-228ENST00000487354 GALNTL5Q7Z4T8 443 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ANKRD37Q7Z713 158 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ZNF227Q86WZ6 799 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 CNGA4Q8IV77 575 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 SPNS2Q8IVW8 549 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 TC2NQ8N9U0 490 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 OR9A4Q8NGU2 314 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ZNF354BQ96LW1 612 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 BIRC8Q96P09 236 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 TTC1Q99614 292 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 VKORC1Q9BQB6 163 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 TMUB1Q9BVT8 246 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ETNK1Q9HBU6 452 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 CATSPERZQ9NTU4 200 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 PCYOX1Q9UHG3 505 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 TSR3Q9UJK0 312 aaKnown RBP14.48□□□□□ -0.09
MCF2L-228ENST00000487354 HRH3Q9Y5N1 445 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 AKAP6Q13023 2319 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ERI2A8K979 691 aaKnown RBP14.47□□□□□ -0.09
MCF2L-228ENST00000487354 HAT1O14929 419 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 CBFA2T2O43439 604 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 CYC1P08574 325 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 MYBL2P10244 700 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 EZRP15311 586 aaKnown RBP14.47□□□□□ -0.09
MCF2L-228ENST00000487354 CD1EP15812 388 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 ARNTP27540 789 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 EEF1DP29692 281 aaKnown RBP14.47□□□□□ -0.09
MCF2L-228ENST00000487354 PRAMEP78395 509 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 ICE2Q659A1 982 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 PTRHD1Q6GMV3 140 aaKnown RBP14.47□□□□□ -0.09
MCF2L-228ENST00000487354 TTC23LQ6PF05 361 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 OTOAQ7RTW8 1153 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 VN1R4Q7Z5H5 301 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-228ENST00000487354 PLD3Q8IV08 490 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 RAB42Q8N4Z0 105 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 DNAAF3Q8N9W5 541 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 OR9A1PQ8NGU1 263 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 PEX13Q92968 403 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 SDCCAG3Q96C92 435 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 PANX3Q96QZ0 392 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 UTP23Q9BRU9 249 aaKnown RBP14.47□□□□□ -0.09
MCF2L-228ENST00000487354 MMP25Q9NPA2 562 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 TREX1Q9NSU2 369 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 GALPQ9UBC7 116 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 TAC3Q9UHF0 121 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 GNPTGQ9UJJ9 305 aa14.47□□□□□ -0.09
MCF2L-228ENST00000487354 ABCA2Q9BZC7 2435 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 ZNF407Q9C0G0 2248 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 GRID2IPA4D2P6 1211 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 GABRR3A8MPY1 467 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 AKR1B15C9JRZ8 316 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-228ENST00000487354 CD3EAPO15446 510 aaKnown RBP14.46□□□□□ -0.09
MCF2L-228ENST00000487354 NIPSNAP2O75323 286 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 PSIP1O75475 530 aaKnown RBP14.46□□□□□ -0.09
MCF2L-228ENST00000487354 TPM1P09493 284 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 ABOP16442 354 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 ATP5DP30049 168 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 PTGER1P34995 402 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 TTPAP49638 278 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 ART1P52961 327 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 RELAQ04206 551 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 PRDX1Q06830 199 aaKnown RBP14.46□□□□□ -0.09
MCF2L-228ENST00000487354 MEP1AQ16819 746 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 AARS2Q5JTZ9 985 aaKnown RBP14.46□□□□□ -0.09
MCF2L-228ENST00000487354 PRUNE1Q86TP1 453 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 LRRC56Q8IYG6 542 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-228ENST00000487354 GHDCQ8N2G8 530 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 PPFIBP2Q8ND30 876 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 SKA2Q8WVK7 121 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-228ENST00000487354 SMPDL3AQ92484 453 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 NRGNQ92686 78 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 PKP4Q99569 1192 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 KCNK13Q9HB14 408 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 CHRAC1Q9NRG0 131 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 REXO2Q9Y3B8 237 aaKnown RBP14.46□□□□□ -0.09
MCF2L-228ENST00000487354 MRFAP1Q9Y605 127 aa14.46□□□□□ -0.09
MCF2L-228ENST00000487354 DNAJC13O75165 2243 aa14.46□□□□□ -0.1
MCF2L-228ENST00000487354 H0YIG0 161 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 FANCGO15287 622 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 NSA2O95478 260 aaKnown RBP14.45□□□□□ -0.1
MCF2L-228ENST00000487354 SP1P08047 785 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 FLNAP21333 2647 aaKnown RBP14.45□□□□□ -0.1
MCF2L-228ENST00000487354 RPA3P35244 121 aaPredicted RBP14.45□□□□□ -0.1
MCF2L-228ENST00000487354 EIF3BP55884 814 aaKnown RBP14.45□□□□□ -0.1
MCF2L-228ENST00000487354 OASLQ15646 514 aaKnown RBP14.45□□□□□ -0.1
MCF2L-228ENST00000487354 MINDY4Q4G0A6 757 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 PDSS2Q86YH6 399 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 CPSF7Q8N684 471 aaKnown RBP14.45□□□□□ -0.1
MCF2L-228ENST00000487354 TMEM178AQ8NBL3 297 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 M1APQ8TC57 530 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 CA5BP1Q8WTZ4 195 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 METTL21AQ8WXB1 218 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms