RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 EBNA1BP2Q99848 306 aaKnown RBP23.31■■□□□ 1.32
LIME1-206ENST00000487026 DRC3Q9H069 523 aa23.31■■□□□ 1.32
LIME1-206ENST00000487026 TRMT6Q9UJA5 497 aaKnown RBP23.31■■□□□ 1.32
LIME1-206ENST00000487026 GOLGA6L10A0A0M3HER8 536 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 CELA2AP08217 269 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 PRR35P0CG20 571 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 PGAM1P18669 254 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 CXCR2P25025 360 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 GABRB3P28472 473 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 RELAQ04206 551 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 DHX9Q08211 1270 aaKnown RBP23.3■■□□□ 1.32
LIME1-206ENST00000487026 MFAP5Q13361 173 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 MSS51Q4VC12 460 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 C2CD4AQ8NCU7 369 aaPredicted RBP23.3■■□□□ 1.32
LIME1-206ENST00000487026 GRHL3Q8TE85 626 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 LMF1Q96S06 567 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 MKKSQ9NPJ1 570 aaPredicted RBP23.3■■□□□ 1.32
LIME1-206ENST00000487026 CCDC177Q9NQR7 707 aaPredicted RBP23.3■■□□□ 1.32
LIME1-206ENST00000487026 AGPAT4Q9NRZ5 378 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 PLA2G3Q9NZ20 509 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 PTGFRNQ9P2B2 879 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 SH2B3Q9UQQ2 575 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 PDE10AQ9Y233 779 aa23.3■■□□□ 1.32
LIME1-206ENST00000487026 TXNDC9O14530 226 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 DDAH2O95865 285 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 TSFMP43897 325 aaKnown RBP23.29■■□□□ 1.32
LIME1-206ENST00000487026 EFNA3P52797 238 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 TBPL1P62380 186 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 PTK6Q13882 451 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 TLR1Q15399 786 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 RBM20Q5T481 1227 aaKnown RBP23.29■■□□□ 1.32
LIME1-206ENST00000487026 PAQR3Q6TCH7 311 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 IGDCC3Q8IVU1 814 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 ZC3H7AQ8IWR0 971 aaKnown RBP23.29■■□□□ 1.32
LIME1-206ENST00000487026 SIRT6Q8N6T7 355 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 OR9A4Q8NGU2 314 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 MCOLN3Q8TDD5 553 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 BRIX1Q8TDN6 353 aaKnown RBP23.29■■□□□ 1.32
LIME1-206ENST00000487026 PSMF1Q92530 271 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 ALKBH8Q96BT7 664 aaKnown RBP23.29■■□□□ 1.32
LIME1-206ENST00000487026 TGIF2Q9GZN2 237 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 DDX47Q9H0S4 455 aaKnown RBP23.29■■□□□ 1.32
LIME1-206ENST00000487026 ATG10Q9H0Y0 220 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 TMEM184CQ9NVA4 438 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 C14orf105Q9NVL8 296 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 TRMT1Q9NXH9 659 aaKnown RBP23.29■■□□□ 1.32
LIME1-206ENST00000487026 SLC17A6Q9P2U8 582 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 ASIC3Q9UHC3 531 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 MKL2Q9ULH7 1088 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 SNX12Q9UMY4 172 aa23.29■■□□□ 1.32
LIME1-206ENST00000487026 IGHV1-45A0A0A0MS14 117 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 DNALI1O14645 258 aaPredicted RBP23.28■■□□□ 1.32
LIME1-206ENST00000487026 LDLRP01130 860 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 AHSGP02765 367 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 PGGT1BP53609 377 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 CDKN2DP55273 166 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 UGT3A1Q6NUS8 523 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 PRSS41Q7RTY9 318 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 VN1R4Q7Z5H5 301 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 OR1N1Q8NGS0 311 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 CCDC138Q96M89 665 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 SLC5A6Q9Y289 635 aa23.28■■□□□ 1.32
LIME1-206ENST00000487026 TEX15Q9BXT5 2789 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 WIPF3A6NGB9 483 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 EIF3FO00303 357 aaPredicted RBP23.27■■□□□ 1.32
LIME1-206ENST00000487026 JRKO75564 520 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 COL8A1P27658 744 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 AVPR1BP47901 424 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 FAM53BQ14153 422 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 NDUFA9Q16795 377 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 HP1BP3Q5SSJ5 553 aaPredicted RBP23.27■■□□□ 1.32
LIME1-206ENST00000487026 AGTRAPQ6RW13 159 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 PARVBQ9HBI1 364 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 TAS2R13Q9NYV9 303 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 UNC79Q9P2D8 2635 aa23.27■■□□□ 1.32
LIME1-206ENST00000487026 FEZF1A0PJY2 475 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 BMP10O95393 424 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 F10P00742 488 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 SERPINA7P05543 415 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 RGS4P49798 205 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 CSNK1G2P78368 415 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 ARG2P78540 354 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 NAE1Q13564 534 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 PCOLCEQ15113 449 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 BBS9Q3SYG4 887 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 SPANXN3Q5MJ09 141 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 B3GNTL1Q67FW5 361 aaPredicted RBP23.26■■□□□ 1.31
LIME1-206ENST00000487026 PALM2Q8IXS6 379 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 ST6GALNAC3Q8NDV1 305 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 LINGO1Q96FE5 620 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 C5orf34Q96MH7 638 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 PWWP2AQ96N64 755 aa23.26■■□□□ 1.31
LIME1-206ENST00000487026 DOPEY1Q5JWR5 2465 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 KCNE1BA0A087WTH5 132 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 ZSCAN12O43309 604 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 LCMT2O60294 686 aaKnown RBP23.25■■□□□ 1.31
LIME1-206ENST00000487026 WFS1O76024 890 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 CLDN1O95832 211 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 C8GP07360 202 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 HRH2P25021 359 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms