RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SLC23A2Q9UGH3 650 aa19.63■□□□□ 0.73
HPS3-206ENST00000486530 XIRP2A4UGR9 3374 aa19.63■□□□□ 0.73
HPS3-206ENST00000486530 DOCK9Q9BZ29 2069 aa19.63■□□□□ 0.73
HPS3-206ENST00000486530 SCAMP2O15127 329 aaKnown RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 RASAL1O95294 804 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 GSNP06396 782 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 TIA1P31483 386 aaKnown RBP eCLIP19.62■□□□□ 0.73
HPS3-206ENST00000486530 GZMMP51124 257 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 CHRNB3Q05901 458 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 IRF4Q15306 451 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 LRIT3Q3SXY7 679 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 NHSL2Q5HYW2 709 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 METRNLQ641Q3 311 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 LCTLQ6UWM7 567 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 CARM1Q86X55 608 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 UBE2E3Q969T4 207 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 AURKBQ96GD4 344 aaPredicted RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 REXO5Q96IC2 774 aaKnown RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 NECTIN4Q96NY8 510 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 HAUS8Q9BT25 410 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 FAM192AQ9GZU8 254 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 SIRT5Q9NXA8 310 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 ADGRE2Q9UHX3 823 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 RNF103-CHMP3A0A140T963 221 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 B3GALT4O96024 378 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 RETP07949 1114 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 ANXA4P09525 319 aaPredicted RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 ERGP11308 486 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 POU3F3P20264 500 aaPredicted RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 TRIM23P36406 574 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 HPCAL1P37235 193 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 WNT3P56703 355 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 PHEXP78562 749 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 MLLT1Q03111 559 aaPredicted RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 ARHGAP19Q14CB8 494 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 THEMIS2Q5TEJ8 643 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 GALNT18Q6P9A2 607 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 CAMKMTQ7Z624 323 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 OR5K2Q8NHB8 316 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 CDC26Q8NHZ8 85 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 EZH1Q92800 747 aaPredicted RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 FAM162AQ96A26 154 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 PANX1Q96RD7 426 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 ZNF696Q9H7X3 374 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 DMRT3Q9NQL9 472 aa19.62■□□□□ 0.73
HPS3-206ENST00000486530 MBNL1Q9NR56 388 aaKnown RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 PHPT1Q9NRX4 125 aaPredicted RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 ZFR2Q9UPR6 939 aaKnown RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 COLQQ9Y215 455 aaPredicted RBP19.62■□□□□ 0.73
HPS3-206ENST00000486530 EVPLLA8MZ36 301 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 PDLIM1O00151 329 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 FPGTO14772 594 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 ACOX3O15254 700 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 SCN2BO60939 215 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 DEAF1O75398 565 aaPredicted RBP19.61■□□□□ 0.73
HPS3-206ENST00000486530 HSD17B2P37059 387 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 RPS21P63220 83 aaKnown RBP19.61■□□□□ 0.73
HPS3-206ENST00000486530 GK3PQ14409 553 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 TP53I13Q8NBR0 393 aaPredicted RBP19.61■□□□□ 0.73
HPS3-206ENST00000486530 TRAPPC9Q96Q05 1148 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 ANKRD60Q9BZ19 345 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 LIMD1Q9UGP4 676 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 ZNF639Q9UID6 485 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 TSC22D4Q9Y3Q8 395 aa19.61■□□□□ 0.73
HPS3-206ENST00000486530 CLOCKO15516 846 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 PCDH7O60245 1069 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 HOXB6P17509 224 aaKnown RBP19.6■□□□□ 0.73
HPS3-206ENST00000486530 MYBPC1Q00872 1141 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 SF1Q15637 639 aaKnown RBP19.6■□□□□ 0.73
HPS3-206ENST00000486530 RNF220Q5VTB9 566 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 KIAA1161Q6NSJ0 714 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 SERPINA11Q86U17 422 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 PHC3Q8NDX5 983 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 GPR156Q8NFN8 814 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 NCLNQ969V3 563 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 CXorf40BQ96DE9 158 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 IL17FQ96PD4 163 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 PRPF18Q99633 342 aaKnown RBP19.6■□□□□ 0.73
HPS3-206ENST00000486530 DUSP26Q9BV47 211 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 FBRSQ9HAH7 460 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 PCDHGB4Q9UN71 923 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 TDRKHQ9Y2W6 561 aaKnown RBP19.6■□□□□ 0.73
HPS3-206ENST00000486530 PCDHGB5Q9Y5G0 923 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 SH3BGRLO75368 114 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 CREG1O75629 220 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 EPN2O95208 641 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 MT-ND1P03886 318 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 SLC35G4P0C7Q5 338 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 IGFBP4P22692 258 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 NTSR1P30989 418 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 PIK3CBP42338 1070 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 FGL2Q14314 439 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 CPTPQ5TA50 214 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 LMNTD1Q8N9Z9 388 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 FBXO30Q8TB52 745 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 TFAP2CQ92754 450 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 FAM131CQ96AQ9 280 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 VPS50Q96JG6 964 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 GABRG3Q99928 467 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 TM7SF3Q9NS93 570 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms