RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 ERVH48-1M5A8F1 160 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 DSCR3O14972 297 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 RIPK2O43353 540 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 KRT38O76015 456 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 S100BP04271 92 aaPredicted RBP11.89□□□□□ -0.51
HMG20B-211ENST00000486028 C2P06681 752 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 CDH1P12830 882 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 GCGRP47871 477 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 CCR8P51685 355 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 EMP3P54852 163 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 PRSS12P56730 875 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 RPS15AP62244 130 aaKnown RBP11.89□□□□□ -0.51
HMG20B-211ENST00000486028 CSNK1G2P78368 415 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 CDC20Q12834 499 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 ERV3-1Q14264 604 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 NCF4Q15080 339 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 OR4D1Q15615 310 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 FAM83EQ2M2I3 478 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 MUM1Q2TAK8 710 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 PRTGQ2VWP7 1150 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 LGSNQ5TDP6 509 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 MLIPQ5VWP3 458 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 ZNF385CQ66K41 422 aaPredicted RBP11.89□□□□□ -0.51
HMG20B-211ENST00000486028 SULT1C3Q6IMI6 304 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 SYVN1Q86TM6 617 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 ISCA2Q86U28 154 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 THOC6Q86W42 341 aaKnown RBP11.89□□□□□ -0.51
HMG20B-211ENST00000486028 TBC1D19Q8N5T2 526 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMG20B-211ENST00000486028 ZDHHC16Q969W1 377 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 PTERQ96BW5 349 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 RHBDF1Q96CC6 855 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 WBP1Q96G27 269 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 CABS1Q96KC9 395 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 OR4K3Q96R72 315 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 DHRS4Q9BTZ2 278 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 TXLNGYQ9BZA5 131 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 ALG9Q9H6U8 611 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 SNX15Q9NRS6 342 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 CD274Q9NZQ7 290 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMG20B-211ENST00000486028 ZNF180Q9UJW8 692 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 SH2B3Q9UQQ2 575 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 PADI2Q9Y2J8 665 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 KCNE2Q9Y6J6 123 aa11.89□□□□□ -0.51
HMG20B-211ENST00000486028 V9GYY5 206 aaPredicted RBP11.89□□□□□ -0.51
HMG20B-211ENST00000486028 HEATR5BQ9P2D3 2071 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 EXOC1LA0A1B0GW35 172 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 NCF1BA6NI72 391 aaPredicted RBP11.88□□□□□ -0.51
HMG20B-211ENST00000486028 NCF1CA8MVU1 366 aaPredicted RBP11.88□□□□□ -0.51
HMG20B-211ENST00000486028 CAPN1P07384 714 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 NCF1P14598 390 aaPredicted RBP11.88□□□□□ -0.51
HMG20B-211ENST00000486028 TFEBP19484 476 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 TNFRSF8P28908 595 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 DLG1Q12959 904 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 TBR1Q16650 682 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 ERCC6LQ2NKX8 1250 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 GARNL3Q5VVW2 1013 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 PRMT9Q6P2P2 845 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 KLC3Q6P597 504 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 FAM198BQ6UWH4 519 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 PLD3Q8IV08 490 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 KLHDC8AQ8IYD2 350 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 ENDOVQ8N8Q3 282 aaKnown RBP11.88□□□□□ -0.51
HMG20B-211ENST00000486028 ZNF454Q8N9F8 522 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 LSM14AQ8ND56 463 aaKnown RBP11.88□□□□□ -0.51
HMG20B-211ENST00000486028 OR4K1Q8NGD4 311 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 DCAKDQ8WVC6 231 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 KCTD4Q8WVF5 259 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 SLC5A11Q8WWX8 675 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 TTC9Q92623 222 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 NEIL2Q969S2 332 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 NXNL1Q96CM4 212 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 RUFY1Q96T51 708 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 CCDC77Q9BR77 488 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 ARHGAP9Q9BRR9 750 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 CAPS2Q9BXY5 557 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 VPS11Q9H270 941 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 IGSF5Q9NSI5 407 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 WWOXQ9NZC7 414 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 RALYQ9UKM9 306 aaKnown RBP11.88□□□□□ -0.51
HMG20B-211ENST00000486028 TCFL5Q9UL49 500 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 CDC14AQ9UNH5 594 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 SLC22A14Q9Y267 594 aa11.88□□□□□ -0.51
HMG20B-211ENST00000486028 CACNA1GO43497 2377 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 TRBC2A0A5B9 178 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 FEZF1A0PJY2 475 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 CDC14CA4D256 554 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 SYCE1LA8MT33 242 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 ATXN7O15265 892 aaPredicted RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 KERAO60938 352 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 H2AFYO75367 372 aaKnown RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 IPO13O94829 963 aaKnown RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 WDR47O94967 919 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 KLHL2O95198 593 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 ONECUT2O95948 504 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 ALDOAP04075 364 aaKnown RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 SNRPAP09012 282 aaKnown RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 GNAZP19086 355 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 GGT5P36269 586 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms