RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ZGRF1Q86YA3 2104 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 SVILO95425 2214 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 A0A0J9YVX5 310 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 ARGFXA6NJG6 315 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 H0YIG0 161 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 H7BY64 318 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 K7EM74 188 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 PEX12O00623 359 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 SOCS6O14544 535 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 RAD51CO43502 376 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 FOXS1O43638 330 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 DPM1O60762 260 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 IPO13O94829 963 aaKnown RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 ZGLP1P0C6A0 271 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 VSIG8P0DPA2 414 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 CSNK1G2P78368 415 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 NFKB2Q00653 900 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 POU4F1Q01851 419 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 GUCY2DQ02846 1103 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 AIMP2Q13155 320 aaKnown RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 ATP1A4Q13733 1029 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 MYBPC3Q14896 1274 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 NDUFA9Q16795 377 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 ZXDCQ2QGD7 858 aaPredicted RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 RBM20Q5T481 1227 aaKnown RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 C1orf189Q5VU69 101 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 AGTRAPQ6RW13 159 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 IGFL2Q6UWQ7 119 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 TMEM207Q6UWW9 146 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 COX15Q7KZN9 410 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 PIWIL4Q7Z3Z4 852 aaKnown RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 STRA8Q7Z7C7 330 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 MRGPREQ86SM8 312 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 TAX1BP1Q86VP1 789 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 PTRH1Q86Y79 214 aaKnown RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 KLHDC8AQ8IYD2 350 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 TMEM151AQ8N4L1 468 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 CLEC1AQ8NC01 280 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 FDCSPQ8NFU4 85 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 PYROXD1Q8WU10 500 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 FBXL8Q96CD0 374 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 RNF31Q96EP0 1072 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 VPS39Q96JC1 886 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 C10orf90Q96M02 699 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 PWWP2AQ96N64 755 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 PRAP1Q96NZ9 151 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 ACAT2Q9BWD1 397 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 RAB17Q9H0T7 212 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 RHOJQ9H4E5 214 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 CLMPQ9H6B4 373 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 ZNF552Q9H707 407 aaPredicted RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 CLK4Q9HAZ1 481 aaKnown RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 PPANQ9NQ55 473 aaKnown RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 CCDC177Q9NQR7 707 aaPredicted RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 P4HTMQ9NXG6 502 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 GRHL1Q9NZI5 618 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 ZNF282Q9UDV7 671 aaPredicted RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 TAC3Q9UHF0 121 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 ADAMTS6Q9UKP5 1117 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 CHMP2BQ9UQN3 213 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 UTP11Q9Y3A2 253 aaKnown RBP6.67□□□□□ -1.34
VPS50-218ENST00000485994 SLC22A7Q9Y694 548 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 DOPEY2Q9Y3R5 2298 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 HIVEP3Q5T1R4 2406 aa6.67□□□□□ -1.34
VPS50-218ENST00000485994 ASH1LQ9NR48 2969 aaKnown RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 LRRK2Q5S007 2527 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 CCDC189A1A4V9 331 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 KRT87PA6NCN2 255 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 FAM159BA6NKW6 160 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 HAT1O14929 419 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 DNAJB5O75953 348 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 WISP3O95389 354 aaPredicted RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 NSA2O95478 260 aaKnown RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 SYF2O95926 243 aaKnown RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 C1QAP02745 245 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PDGFAP04085 211 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 F7P08709 466 aaPredicted RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 ZNF37AP17032 561 aaPredicted RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 IL10P22301 178 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 GGT5P36269 586 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 HNMTP50135 292 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PGDP52209 483 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 OCA2Q04671 838 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 TLE1Q04724 770 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 NAE1Q13564 534 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 FASTKD3Q14CZ7 662 aaKnown RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 PHKG1Q16816 387 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PPP1R3AQ16821 1122 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 VWA5B1Q5TIE3 1220 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 CAPN13Q6MZZ7 669 aaPredicted RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 NIPAL1Q6NVV3 410 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 KIRREL2Q6UWL6 708 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 SBSNQ6UWP8 590 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 SYT10Q6XYQ8 523 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 C3orf62Q6ZUJ4 267 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PRICKLE2Q7Z3G6 844 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PPP1R32Q7Z5V6 425 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 C17orf64Q86WR6 236 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 ZBED8Q8IZ13 594 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 C17orf53Q8N3J3 647 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms