RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SPATA13Q96N96 652 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 RANBP9Q96S59 729 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 EFHD1Q9BUP0 239 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 CCDC68Q9H2F9 335 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 WDR41Q9HAD4 459 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 C8orf4Q9NR00 106 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 FOXJ2Q9P0K8 574 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TMEM216Q9P0N5 145 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 SCHIP1Q9P0W5 487 aaPredicted RBP10.41□□□□□ -0.74
DDX56-212ENST00000485367 PCDHGB4Q9UN71 923 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 AAR2Q9Y312 384 aaKnown RBP10.41□□□□□ -0.74
DDX56-212ENST00000485367 RNF11Q9Y3C5 154 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 PCDHGB5Q9Y5G0 923 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 LOC400499M0QZD8 3231 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 C9orf172C9J069 976 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 GPR39O43194 453 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 VIPP01282 170 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 IDSP22304 550 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 S100A1P23297 94 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 ARRB2P32121 409 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 SPRP35270 261 aaPredicted RBP10.4□□□□□ -0.74
DDX56-212ENST00000485367 ADRA1AP35348 466 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 HADHAP40939 763 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 CEACAM7Q14002 265 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 SPANXN3Q5MJ09 141 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 LDLRAP1Q5SW96 308 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 GPR180Q86V85 440 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 TRIM48Q8IWZ4 208 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 MPP5Q8N3R9 675 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 ZNF781Q8N8C0 355 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 AVL9Q8NBF6 648 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 AGBL5Q8NDL9 886 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 CCNL2Q96S94 520 aaPredicted RBP10.4□□□□□ -0.74
DDX56-212ENST00000485367 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.4□□□□□ -0.74
DDX56-212ENST00000485367 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.4□□□□□ -0.74
DDX56-212ENST00000485367 SSUH2Q9Y2M2 353 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 AP4S1Q9Y587 144 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 ARL5AQ9Y689 179 aa10.4□□□□□ -0.74
DDX56-212ENST00000485367 FASNP49327 2511 aaKnown RBP10.4□□□□□ -0.75
DDX56-212ENST00000485367 C2orf81A6NN90 581 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 ATXN7O15265 892 aaPredicted RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 METTL18O95568 372 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 ESRRBO95718 433 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 LPOP22079 712 aaPredicted RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 RPL10P27635 214 aaKnown RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 CA5AP35218 305 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 SERPINB5P36952 375 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 RPL14P50914 215 aaKnown RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 UBE2IP63279 158 aaKnown RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 RHDQ02161 417 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 PRKAA1Q13131 559 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 COL9A2Q14055 689 aaPredicted RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 GK3PQ14409 553 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 MAPRE2Q15555 327 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 TAF1AQ15573 450 aaPredicted RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 GPRC6AQ5T6X5 926 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 NEPROQ6NW34 567 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 WDR74Q6RFH5 385 aaPredicted RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 RANBP10Q6VN20 620 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 ATG14Q6ZNE5 492 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 FAM129CQ86XR2 697 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 GALNT4Q8N4A0 578 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 EFCAB3Q8N7B9 438 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 RASGEF1AQ8N9B8 481 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 SCAIQ8N9R8 606 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 OR4K2Q8NGD2 314 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 PPP1R2P1Q96PQ5 205 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 TAAR9Q96RI9 348 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 DOK1Q99704 481 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 ZCCHC2Q9C0B9 1178 aaKnown RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 ZBTB26Q9HCK0 441 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 OLAHQ9NV23 265 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 OCIAD1Q9NX40 245 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 QPCTLQ9NXS2 382 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 SLC39A1Q9NY26 324 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 ZNF624Q9P2J8 865 aaPredicted RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 KLHL3Q9UH77 587 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 ACSL6Q9UKU0 697 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 KCTD3Q9Y597 815 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 PCDHB11Q9Y5F2 797 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 TRIM64A6NGJ6 449 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 EFCAB7A8K855 629 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 G3V2L1 256 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 GAPDHSO14556 408 aaPredicted RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 SERPINB7O75635 380 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 POP7O75817 140 aaKnown RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 PRAMEF1O95521 474 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 LIPCP11150 499 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 TYRP1P17643 537 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 SLC7A1P30825 629 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 AKT1P31749 480 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 SLC19A1P41440 591 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 CTSCP53634 463 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 EPHA4P54764 986 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 MS4A2Q01362 244 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
DDX56-212ENST00000485367 TMEM220Q6QAJ8 160 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 ABRAXAS1Q6UWZ7 409 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 TMEM26Q6ZUK4 368 aa10.39□□□□□ -0.75
DDX56-212ENST00000485367 C11orf96Q7Z7L8 435 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms