RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 DDX47Q9H0S4 455 aaKnown RBP4.18□□□□□ -1.74
VPS13A-211ENST00000484581 KCNMB3Q9NPA1 279 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 PHPT1Q9NRX4 125 aaPredicted RBP4.18□□□□□ -1.74
VPS13A-211ENST00000484581 ZDHHC2Q9UIJ5 367 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 KCNS2Q9ULS6 477 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 ATP8B3O60423 1300 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 SSX5O60225 188 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SMPD2O60906 423 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 CXCL10P02778 98 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 PRSS2P07478 247 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 MMP10P09238 476 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 RPA1P27694 616 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 CCND2P30279 289 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 ARRB2P32121 409 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 NKX2-1P43699 371 aaPredicted RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 PCYT1AP49585 367 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SLC26A5P58743 744 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SRP54P61011 504 aaKnown RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 GALK2Q01415 458 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 CETN1Q12798 172 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 DLG1Q12959 904 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 TRADDQ15628 312 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 ITPRIPL2Q3MIP1 535 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 PHLDA2Q53GA4 152 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 FASTKD1Q53R41 847 aaKnown RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 FUT10Q6P4F1 479 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 FAM171BQ6P995 826 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 PSRC1Q6PGN9 363 aaPredicted RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 DLEU7Q6UYE1 221 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SIGLEC15Q6ZMC9 328 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 PIWIL4Q7Z3Z4 852 aaKnown RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 ADAMTSL2Q86TH1 951 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 LCA5Q86VQ0 697 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 KCNH5Q8NCM2 988 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SMRP1Q8NCR6 262 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 TMEM185AQ8NFB2 350 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SPATA3Q8NHX4 192 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 FAM46BQ96A09 425 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 TRIM44Q96DX7 344 aaPredicted RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 ALG14Q96F25 216 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 MYCBPQ99417 103 aaPredicted RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF577Q9BSK1 485 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 TRAF4Q9BUZ4 470 aaPredicted RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SLC39A8Q9C0K1 460 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 CSTL1Q9H114 145 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 SDCBP2Q9H190 292 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 FKRPQ9H9S5 495 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 APOBEC3GQ9HC16 384 aaKnown RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 GPN1Q9HCN4 374 aaPredicted RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 PPANQ9NQ55 473 aaKnown RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 TCF7L2Q9NQB0 619 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 ZCCHC3Q9NUD5 404 aaKnown RBP4.17□□□□□ -1.74
VPS13A-211ENST00000484581 MIS18AQ9NYP9 233 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 WNT16Q9UBV4 365 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 DNPEPQ9ULA0 475 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 KCNJ14Q9UNX9 436 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 PLEKHA6Q9Y2H5 1048 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF510Q9Y2H8 683 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 FAM205AQ6ZU69 1335 aa4.17□□□□□ -1.74
VPS13A-211ENST00000484581 TRAV18A0A075B6X5 111 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 A0A1W2PN81 502 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 TMEM129A0AVI4 362 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 MAGEB16A2A368 324 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 CLEC18AA5D8T8 446 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 ANKDD1BA6NHY2 528 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 KPNA7A9QM74 516 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 C2CD4DB7Z1M9 353 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 SLC28A1O00337 649 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 MAGEB2O15479 319 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 PAPSS2O95340 614 aaPredicted RBP4.16□□□□□ -1.74
VPS13A-211ENST00000484581 BAG3O95817 575 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 DLATP10515 647 aaKnown RBP4.16□□□□□ -1.74
VPS13A-211ENST00000484581 SKILP12757 684 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 CPA3P15088 417 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF18P17022 549 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 SSTR1P30872 391 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 CHRNA7P36544 502 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 LINC00205P59089 165 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 KCNJ10P78508 379 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 SLC3A1Q07837 685 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 PPP1R8Q12972 351 aaKnown RBP4.16□□□□□ -1.74
VPS13A-211ENST00000484581 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 KIAA1161Q6NSJ0 714 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 TTC27Q6P3X3 843 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 CORO6Q6QEF8 472 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 CD164L2Q6UWJ8 174 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 ISLR2Q6UXK2 745 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF554Q86TJ5 538 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 SATL1Q86VE3 508 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 MUC20Q8N307 709 aaPredicted RBP4.16□□□□□ -1.74
VPS13A-211ENST00000484581 CLEC18CQ8NCF0 446 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 GRHL3Q8TE85 626 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 GGHQ92820 318 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 RTP3Q9BQQ7 232 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 DPH5Q9H2P9 285 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 ZDHHC6Q9H6R6 413 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 TLE6Q9H808 572 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 SLC7A7Q9UM01 511 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms