RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TTC23LQ6PF05 361 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 VN1R4Q7Z5H5 301 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 LINC00523Q86TU6 105 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 OR9A1PQ8NGU1 263 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 ATG4AQ8WYN0 398 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 FAM136AQ96C01 138 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 LRRC45Q96CN5 670 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 MAGED4Q96JG8 741 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 PKP4Q99569 1192 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 TTC1Q99614 292 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 LACRTQ9GZZ8 138 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 DRC3Q9H069 523 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 CATSPERZQ9NTU4 200 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 SPATA7Q9P0W8 599 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 TNFRSF10DQ9UBN6 386 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 PACSIN2Q9UNF0 486 aaPredicted RBP12.15□□□□□ -0.46
UBR4-213ENST00000483922 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
UBR4-213ENST00000483922 GTF3C1Q12789 2109 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 HEATR5BQ9P2D3 2071 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 GRID2IPA4D2P6 1211 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 E7ENX8 843 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 E9PLN8 166 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 MYO1CO00159 1063 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 HAT1O14929 419 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 NIPSNAP2O75323 286 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 PSIP1O75475 530 aaKnown RBP12.14□□□□□ -0.47
UBR4-213ENST00000483922 TPM3P06753 285 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 UQCRHP07919 91 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 SP1P08047 785 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 RPS3P23396 243 aaKnown RBP eCLIP12.14□□□□□ -0.47
UBR4-213ENST00000483922 ARNTP27540 789 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 EEF1DP29692 281 aaKnown RBP12.14□□□□□ -0.47
UBR4-213ENST00000483922 CRADDP78560 199 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 TAP2Q03519 686 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 RELAQ04206 551 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 FAM53BQ14153 422 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 LONRF1Q17RB8 773 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 KCTD19Q17RG1 926 aaPredicted RBP12.14□□□□□ -0.47
UBR4-213ENST00000483922 ACSBG2Q5FVE4 666 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 ICE2Q659A1 982 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 OTOAQ7RTW8 1153 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 CPSF7Q8N684 471 aaKnown RBP12.14□□□□□ -0.47
UBR4-213ENST00000483922 PHF10Q8WUB8 498 aaKnown RBP12.14□□□□□ -0.47
UBR4-213ENST00000483922 ZNF480Q8WV37 535 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 CHTF18Q8WVB6 975 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 SKA2Q8WVK7 121 aaPredicted RBP12.14□□□□□ -0.47
UBR4-213ENST00000483922 SDCCAG3Q96C92 435 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 SLC30A3Q99726 388 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 VKORC1Q9BQB6 163 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 ANP32EQ9BTT0 268 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 TSSK1BQ9BXA7 367 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 UCK2Q9BZX2 261 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 KCNK13Q9HB14 408 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 TREX1Q9NSU2 369 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 TAC3Q9UHF0 121 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 PCYOX1Q9UHG3 505 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 TEKT2Q9UIF3 430 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 NAV3Q8IVL0 2385 aa12.14□□□□□ -0.47
UBR4-213ENST00000483922 PRPF4O43172 522 aaKnown RBP eCLIP12.13□□□□□ -0.47
UBR4-213ENST00000483922 CBFA2T2O43439 604 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 F7P08709 466 aaPredicted RBP12.13□□□□□ -0.47
UBR4-213ENST00000483922 ANXA5P08758 320 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 NMBRP28336 390 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 FMO4P31512 558 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 PTGER1P34995 402 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 CCNFP41002 786 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 ART1P52961 327 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 PRAMEP78395 509 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 KCNJ11Q14654 390 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 TMED2Q15363 201 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 OASLQ15646 514 aaKnown RBP12.13□□□□□ -0.47
UBR4-213ENST00000483922 MEP1AQ16819 746 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 SLC25A25Q6KCM7 469 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 PDSS2Q86YH6 399 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 CNGA4Q8IV77 575 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 RPRMLQ8N4K4 120 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 KIF2BQ8N4N8 673 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 OR51Q1Q8NH59 317 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 M1APQ8TC57 530 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 SMPDL3AQ92484 453 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 UTP23Q9BRU9 249 aaKnown RBP12.13□□□□□ -0.47
UBR4-213ENST00000483922 CDCP1Q9H5V8 836 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 LANCL2Q9NS86 450 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 HCN3Q9P1Z3 774 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 ACANP16112 2415 aa12.13□□□□□ -0.47
UBR4-213ENST00000483922 PRRC2AP48634 2157 aaKnown RBP12.13□□□□□ -0.47
UBR4-213ENST00000483922 HRNRQ86YZ3 2850 aaPredicted RBP12.12□□□□□ -0.47
UBR4-213ENST00000483922 HCFC1P51610 2035 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 NKX2-6A6NCS4 301 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 ERI2A8K979 691 aaKnown RBP12.12□□□□□ -0.47
UBR4-213ENST00000483922 GABRR3A8MPY1 467 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 F8W8V4 182 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 GOLGA8TH3BQL2 631 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 H7BY64 318 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 SGK494L7N484 410 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 PHF2O75151 1096 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 TOXO94900 526 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 NSA2O95478 260 aaKnown RBP12.12□□□□□ -0.47
UBR4-213ENST00000483922 SLC16A8O95907 504 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms