RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 PRICKLE1Q96MT3 831 aaPredicted RBP3.43□□□□□ -1.86
COMMD3-213ENST00000483684 MAP3K3Q99759 626 aa3.43□□□□□ -1.86
COMMD3-213ENST00000483684 SLF1Q9BQI6 1058 aa3.43□□□□□ -1.86
COMMD3-213ENST00000483684 DNAJC4Q9NNZ3 241 aa3.43□□□□□ -1.86
COMMD3-213ENST00000483684 FAM120CQ9NX05 1096 aaKnown RBP3.43□□□□□ -1.86
COMMD3-213ENST00000483684 TBC1D7Q9P0N9 293 aa3.43□□□□□ -1.86
COMMD3-213ENST00000483684 CLSPNQ9HAW4 1339 aa3.43□□□□□ -1.86
COMMD3-213ENST00000483684 IGHV3OR16-10A0A075B7F0 116 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 SYNDIG1LA6NDD5 238 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 CCL24O00175 119 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 AP5Z1O43299 807 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 SNX3O60493 162 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 DKC1O60832 514 aaKnown RBP eCLIP3.42□□□□□ -1.86
COMMD3-213ENST00000483684 ATP6AP2O75787 350 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 GSRP00390 522 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 OR52Z1P0C646 297 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 CPT2P23786 658 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 EEF1B2P24534 225 aaKnown RBP3.42□□□□□ -1.86
COMMD3-213ENST00000483684 ALDH1B1P30837 517 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 KRT20P35900 424 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 SOX3P41225 446 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 TMEM50BP56557 158 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 CLDN15P56746 228 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 RBPJQ06330 500 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 RASGEF1BQ0VAM2 473 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 TRIM29Q14134 588 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 NONOQ15233 471 aaKnown RBP eCLIP3.42□□□□□ -1.86
COMMD3-213ENST00000483684 PTPN14Q15678 1187 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 MTHFSDQ2M296 383 aaKnown RBP3.42□□□□□ -1.86
COMMD3-213ENST00000483684 TMEM266Q2M3C6 531 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 PLBD1Q6P4A8 553 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 RYBPQ8N488 228 aaPredicted RBP3.42□□□□□ -1.86
COMMD3-213ENST00000483684 ANKRD13CQ8N6S4 541 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 XXYLT1Q8NBI6 393 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 KCTD6Q8NC69 237 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 C11orf45Q8TAV5 145 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 C2orf48Q96LS8 159 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 FAM218AQ96MZ4 157 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 TXLNGYQ9BZA5 131 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 GSN-AS1Q9NRJ2 163 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 WDR35Q9P2L0 1181 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 MUTYHQ9UIF7 546 aa3.42□□□□□ -1.86
COMMD3-213ENST00000483684 TRBV4-1A0A0J9YWV2 114 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 H7C0S8 307 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 DIAPH2O60879 1101 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 RPS6KA5O75582 802 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 KRT33AO76009 404 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 BAG3O95817 575 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 MYBL1P10243 752 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 TLX1P31314 330 aaPredicted RBP3.41□□□□□ -1.86
COMMD3-213ENST00000483684 OR3A2P47893 321 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 LIMK1P53667 647 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 UBASH3AP57075 661 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 AIMP1Q12904 312 aaKnown RBP3.41□□□□□ -1.86
COMMD3-213ENST00000483684 PRPF4BQ13523 1007 aaKnown RBP3.41□□□□□ -1.86
COMMD3-213ENST00000483684 LY6DQ14210 128 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 TAB1Q15750 504 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 NOTUMQ6P988 496 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 FRRS1Q6ZNA5 592 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 RBPMS2Q6ZRY4 209 aaKnown RBP3.41□□□□□ -1.86
COMMD3-213ENST00000483684 TLK2Q86UE8 772 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 LMNTD2Q8IXW0 634 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 MAML2Q8IZL2 1156 aaPredicted RBP3.41□□□□□ -1.86
COMMD3-213ENST00000483684 MIPOL1Q8TD10 442 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 ATP8B4Q8TF62 1192 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 METTL21AQ8WXB1 218 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 ROBO4Q8WZ75 1007 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 PIK3R3Q92569 461 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 HDAC11Q96DB2 347 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 PGAP3Q96FM1 320 aaPredicted RBP3.41□□□□□ -1.86
COMMD3-213ENST00000483684 AGAP4Q96P64 663 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 HOXD1Q9GZZ0 328 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 TXNDC16Q9P2K2 825 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 CSAG2Q9Y5P2 127 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 ZHX2Q9Y6X8 837 aa3.41□□□□□ -1.86
COMMD3-213ENST00000483684 TRAV24A0A0B4J272 114 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 BICDL2A1A5D9 508 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 A8MU10 97 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 C2CD4DB7Z1M9 353 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 CAPN2P17655 700 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 ACHEP22303 614 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 ELAVL4P26378 380 aaKnown RBP3.4□□□□□ -1.87
COMMD3-213ENST00000483684 RAB28P51157 221 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 IRX4P78413 519 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 CALD1Q05682 793 aaKnown RBP3.4□□□□□ -1.87
COMMD3-213ENST00000483684 SGCGQ13326 291 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 MFSD4BQ5TF39 518 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 CTR9Q6PD62 1173 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 FCRLAQ7L513 359 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 Q8N377 158 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 TSACCQ96A04 125 aaPredicted RBP3.4□□□□□ -1.87
COMMD3-213ENST00000483684 SPSB1Q96BD6 273 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 CNRIP1Q96F85 164 aaPredicted RBP3.4□□□□□ -1.87
COMMD3-213ENST00000483684 ATXN7L3BQ96GX2 97 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 LRRC3BQ96PB8 259 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 TDRD1Q9BXT4 1180 aaKnown RBP3.4□□□□□ -1.87
COMMD3-213ENST00000483684 B3GAT2Q9NPZ5 323 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 NDE1Q9NXR1 346 aa3.4□□□□□ -1.87
COMMD3-213ENST00000483684 PRDM4Q9UKN5 801 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms