RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ITGB6P18564 788 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 PCMT1P22061 227 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 NMT1P30419 496 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 DLSTP36957 453 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 SLC6A12P48065 614 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 CNN1P51911 297 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 ATP12AP54707 1039 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 TSPAN5P62079 268 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 CYP4F2P78329 520 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 NCBP1Q09161 790 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 ENPP2Q13822 863 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 NONOQ15233 471 aaKnown RBP eCLIP3.97□□□□□ -1.77
VPS41-212ENST00000482217 MAPK11Q15759 364 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 USP41Q3LFD5 358 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 ATP13A5Q4VNC0 1218 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 RUNDC3AQ59EK9 446 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 TMEM41BQ5BJD5 291 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 PPP6R3Q5H9R7 873 aaPredicted RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 PAGE2BQ5JRK9 111 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 CLVS2Q5SYC1 327 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 PRAMEF7Q5VXH5 474 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 CARD17Q5XLA6 110 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 SPECC1LQ69YQ0 1117 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 TMEM53Q6P2H8 277 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 STXBP4Q6ZWJ1 553 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 TRMT10CQ7L0Y3 403 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 BCDIN3DQ7Z5W3 292 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 ASPGQ86U10 573 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 VPS36Q86VN1 386 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 CHERPQ8IWX8 916 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 TIGD4Q8IY51 512 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 SELENOHQ8IZQ5 122 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 COMMD1Q8N668 190 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 ANKRD13CQ8N6S4 541 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 CCDC63Q8NA47 563 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 FNDC5Q8NAU1 212 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 STKLD1Q8NE28 680 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 OR10S1Q8NGN2 331 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 MITD1Q8WV92 249 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 SARAFQ96BY9 339 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 RHBDF1Q96CC6 855 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 NXNL1Q96CM4 212 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 ARSGQ96EG1 525 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 ELMO2Q96JJ3 720 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 MMS19Q96T76 1030 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 KCNS3Q9BQ31 491 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 API5Q9BZZ5 524 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 MFFQ9GZY8 342 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 DDX47Q9H0S4 455 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 NOL11Q9H8H0 719 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 ANKRA2Q9H9E1 313 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 KIF9Q9HAQ2 790 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 ROPN1Q9HAT0 212 aaPredicted RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 UPF2Q9HAU5 1272 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 ZFP14Q9HCL3 533 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 RANGRFQ9HD47 186 aaPredicted RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 PPANQ9NQ55 473 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 SLC6A13Q9NSD5 602 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 PIGVQ9NUD9 493 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 HIF1ANQ9NWT6 349 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 SLC39A1Q9NY26 324 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 TUBA8Q9NY65 449 aaPredicted RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 KLHL8Q9P2G9 620 aaPredicted RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 LARSQ9P2J5 1176 aaKnown RBP3.97□□□□□ -1.77
VPS41-212ENST00000482217 CTNNAL1Q9UBT7 734 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 RHBDD3Q9Y3P4 386 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 INSL6Q9Y581 213 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 PCDHGB1Q9Y5G3 927 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 RNF215Q9Y6U7 377 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 SMARCA2P51531 1590 aa3.97□□□□□ -1.77
VPS41-212ENST00000482217 A0A0U1RRA0 63 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 LOC105371267A0A1B0GV96 52 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 C13orf42A0A1B0GVH6 325 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 A0A1W2PRG0 241 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 MBD3L5A6NJ08 208 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 NPIPB5A8MRT5 1133 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 MAGEB17A8MXT2 336 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 TRIM77I1YAP6 450 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ZNF701M0R085 212 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 OVOL3O00110 214 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ZNF208O43345 1280 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 PRAMEF2O60811 474 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 CDH16O75309 829 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 TRIM3O75382 744 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 CSO75390 466 aaKnown RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 PDE9AO76083 593 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 NKX2-2O95096 273 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 C1RP00736 705 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ADAP00813 363 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 MBPP02686 304 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 STAG3L2P0CL84 134 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 GPD1P21695 349 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 YWHAQP27348 245 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 FMO4P31512 558 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 OR1D2P34982 312 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 RORAP35398 523 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 SLC1A3P43003 542 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 CBX5P45973 191 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 CSNK1EP49674 416 aaKnown RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 BCAP31P51572 246 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms