RNA–Protein interactions for RNA: ENST00000481639.1

PHC3-208, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-208ENST00000481639 ZFHX2Q9C0A1 2572 aaPredicted RBP5.7□□□□□ -1.5
PHC3-208ENST00000481639 CACNA1HO95180 2353 aa5.7□□□□□ -1.5
PHC3-208ENST00000481639 EML5Q05BV3 1969 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 CENPVL1A0A0U1RR11 272 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 TMEM202A6NGA9 273 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 PRR5-ARHGAP8B1AHC4 643 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 TMEM114B3SHH9 223 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 TMEM233B4DJY2 109 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 LOC730098B7Z3J9 87 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 UBXN8O00124 270 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 UBFD1O14562 309 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 AP1G1O43747 822 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 KERAO60938 352 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 MTX2O75431 263 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 RECQL5O94762 991 aaPredicted RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 LMNAP02545 664 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 APOA4P06727 396 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ITGB6P18564 788 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ATP5F1P24539 256 aaPredicted RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 NTSR1P30989 418 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 SLC1A6P48664 564 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 CTSCP53634 463 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 PRKAA2P54646 552 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 NAGLUP54802 743 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 SLC12A2P55011 1212 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 HNRNPH2P55795 449 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 ABCE1P61221 599 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 SATB1Q01826 763 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 STX3Q13277 289 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ARHGEF7Q14155 803 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 RCN2Q14257 317 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 FGL2Q14314 439 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 LEXMQ3ZCV2 418 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 GALNTL6Q49A17 601 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 UNC50Q53HI1 259 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ACSBG2Q5FVE4 666 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ARL13AQ5H913 290 aaPredicted RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 AGAP9Q5VTM2 703 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 LYPLAL1Q5VWZ2 237 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ZDHHC20Q5W0Z9 365 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ATG16L1Q676U5 607 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 SBSNQ6UWP8 590 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 CYHR1Q6ZMK1 362 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 PIWIL4Q7Z3Z4 852 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 GDF7Q7Z4P5 450 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 RALGPS2Q86X27 583 aaPredicted RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 CACUL1Q86Y37 369 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 RAVER1Q8IY67 606 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 NRSN1Q8IZ57 195 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 FITM2Q8N6M3 262 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ZNF781Q8N8C0 355 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 OR2T3Q8NH03 318 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 RHEBL1Q8TAI7 183 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 MAPK15Q8TD08 544 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 CSGALNACT1Q8TDX6 532 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 CCT6BQ92526 530 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 DNASE1L2Q92874 299 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.69□□□□□ -1.5
PHC3-208ENST00000481639 SKA1Q96BD8 255 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ULK4Q96C45 1275 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 GRAMD1AQ96CP6 724 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 L3HYPDHQ96EM0 354 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 LINGO1Q96FE5 620 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 PDLIM5Q96HC4 596 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 VPS35Q96QK1 796 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 EBF4Q9BQW3 602 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ZSCAN5AQ9BUG6 496 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 PHF7Q9BWX1 381 aaPredicted RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 DRC3Q9H069 523 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 CLPBQ9H078 707 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 NSRP1Q9H0G5 558 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 FAM83DQ9H4H8 585 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 GSTO2Q9H4Y5 243 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 TFB2MQ9H5Q4 396 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 CD93Q9NPY3 652 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 PNPOQ9NVS9 261 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 THAP1Q9NVV9 213 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 PKD2L2Q9NZM6 624 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 MARCOQ9UEW3 520 aaPredicted RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 CRLS1Q9UJA2 301 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 TRMT6Q9UJA5 497 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 CDYLQ9Y232 598 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 DNAJC16Q9Y2G8 782 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ARL2BPQ9Y2Y0 163 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 PLXND1Q9Y4D7 1925 aa5.69□□□□□ -1.5
PHC3-208ENST00000481639 ATXN2Q99700 1313 aaKnown RBP5.69□□□□□ -1.5
PHC3-208ENST00000481639 TMEM200CA6NKL6 621 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 CCT8L1PA6NM43 557 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 PPP6CO00743 305 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 NPC1O15118 1278 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 GRID2O43424 1007 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 DCXO43602 365 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 PRAMEF4O60810 478 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 VPS26AO75436 327 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 SIX3O95343 332 aaPredicted RBP5.68□□□□□ -1.5
PHC3-208ENST00000481639 KLF8O95600 359 aaPredicted RBP5.68□□□□□ -1.5
PHC3-208ENST00000481639 RPS17P08708 135 aaKnown RBP5.68□□□□□ -1.5
PHC3-208ENST00000481639 RBP1P09455 135 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 IL9P15248 144 aa5.68□□□□□ -1.5
PHC3-208ENST00000481639 ZNF7P17097 686 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms