RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 FERD3LQ96RJ6 166 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 B3GNT4Q9C0J1 378 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TSPAN10Q9H1Z9 355 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 ETNK2Q9NVF9 386 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 SAMHD1Q9Y3Z3 626 aaKnown RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 A0A087X0B3 334 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 MATN3O15232 486 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 RAB3DO95716 219 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 HOXD8P13378 290 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 LCN1P31025 176 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 DAOAP59103 153 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ERVK-21P61565 698 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 MLLT1Q03111 559 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 GRM4Q14833 912 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TMEM69Q5SWH9 247 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 HECTD2Q5U5R9 776 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 GPR149Q86SP6 731 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 NPAS4Q8IUM7 802 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 GID4Q8IVV7 300 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ZNF101Q8IZC7 436 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 PLD6Q8N2A8 252 aaKnown RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 OR1M1Q8NGA1 313 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 SPTSSAQ969W0 71 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 GTPBP3Q969Y2 492 aaKnown RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 FZD3Q9NPG1 666 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ARMC1Q9NVT9 282 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 FAM118AQ9NWS6 357 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 STAP2Q9UGK3 403 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 CBY1Q9Y3M2 126 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 MAP3K19Q56UN5 1328 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 PRR5-ARHGAP8B1AHC4 643 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 HDAC3O15379 428 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ELFN1P0C7U0 828 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 XRCC1P18887 633 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 RBMS1P29558 406 aaKnown RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 ECI1P42126 302 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 GSK3AP49840 483 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ANTXR2P58335 489 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 RPL23AP62750 156 aaKnown RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 BNIP3Q12983 259 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 GBX1Q14549 363 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 PTGR1Q14914 329 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 CNKSR3Q6P9H4 555 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 NYAP1Q6ZVC0 841 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 CYB5R4Q7L1T6 521 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 LINGO2Q7L985 606 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TRAM1L1Q8N609 369 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 OR5B17Q8NGF7 314 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TECTBQ96PL2 329 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 G6PC3Q9BUM1 346 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 GLOD4Q9HC38 313 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 RAB18Q9NP72 206 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 JAG2Q9Y219 1238 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 NPIPA2E9PIF3 369 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 NPIPA3F8WFD2 350 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 YIF1AO95070 293 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 CBX6O95503 412 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ICAM2P13598 275 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 RFC2P35250 354 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 SLC20A2Q08357 652 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 BRICD5Q6PL45 260 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 KCTD1Q719H9 257 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ERI1Q8IV48 349 aaKnown RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 ZFPM1Q8IX07 1006 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 POU5F2Q8N7G0 328 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 SNRNP27Q8WVK2 155 aaKnown RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 DIRAS2Q96HU8 199 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 DGAT2Q96PD7 388 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TMEM39BQ9GZU3 492 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 PLEKHJ1Q9NW61 149 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 WDR97A6NE52 1622 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TRIP11Q15643 1979 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TPST1O60507 370 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TMEM225BP0DP42 221 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 CYP11B1P15538 503 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 CREB1P16220 341 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 HTR5AP47898 357 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 GPR176Q14439 515 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 DECR1Q16698 335 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 LILRB2Q8N423 598 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 COX18Q8N8Q8 333 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 MFSD2AQ8NA29 543 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 RNF25Q96BH1 459 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 MRPL38Q96DV4 380 aaKnown RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 JSRP1Q96MG2 331 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 ZNF184Q99676 751 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 SGIP1Q9BQI5 828 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 OR2J1Q9GZK6 312 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 MIR1-1HGQ9H1L0 117 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ACTL8Q9H568 366 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 PTPRHQ9HD43 1115 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 RBM22Q9NW64 420 aaKnown RBP eCLIP5.3□□□□□ -1.56
USF3-202ENST00000478658 SARDHQ9UL12 918 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TCFL5Q9UL49 500 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 MGAT4BQ9UQ53 548 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 SNX24Q9Y343 169 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 FAM205CA6NFA0 338 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 C4orf47A7E2U8 309 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TOR1BO14657 336 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms