RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 OR2A5Q96R48 311 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 MACROD1Q9BQ69 325 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 NDC1Q9BTX1 674 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 CHST8Q9H2A9 424 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 SPNS1Q9H2V7 528 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 TXLNGQ9NUQ3 528 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 NUDT4Q9NZJ9 180 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 NDOR1Q9UHB4 597 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 PADI1Q9ULC6 663 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 AP1M2Q9Y6Q5 423 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 ACACAQ13085 2346 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 ADAMTS20P59510 1910 aa9.82□□□□□ -0.84
HDAC6-222ENST00000478095 USP24Q9UPU5 2620 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 IQANK1A0A1B0GTG1 560 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 P2RX6O15547 441 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 SRPX2O60687 465 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 KATNA1O75449 491 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 MED26O95402 600 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 KLK3P07288 261 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 MTHFD2P13995 350 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 GFAPP14136 432 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 TCN2P20062 427 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 VARSP26640 1264 aaKnown RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 BCL6P41182 706 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 CCR8P51685 355 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 UCNP55089 124 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 RPS18P62269 152 aaKnown RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 CYP4F2P78329 520 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 DNASE1L3Q13609 305 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 GRM7Q14831 915 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 TECRLQ5HYJ1 363 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 TCTE1Q5JU00 501 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 FAM69BQ5VUD6 431 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 RHBDD2Q6NTF9 364 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 TLDC1Q6P9B6 456 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 DSELQ8IZU8 1212 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 TCAIMQ8N3R3 496 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 SNX31Q8N9S9 440 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 TTC29Q8NA56 475 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 ZNF740Q8NDX6 193 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 RHEBL1Q8TAI7 183 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 MZB1Q8WU39 189 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 CAVIN3Q969G5 261 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 RERGQ96A58 199 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 MTBPQ96DY7 904 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 LRFN5Q96NI6 719 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 ZNF285Q96NJ3 590 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 TMUB1Q9BVT8 246 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 CNOT10Q9H9A5 744 aaKnown RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 CUTCQ9NTM9 273 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 TMEM184CQ9NVA4 438 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 CPSF2Q9P2I0 782 aaKnown RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 XPR1Q9UBH6 696 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 FETUBQ9UGM5 382 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 PTBP2Q9UKA9 531 aaKnown RBP9.81□□□□□ -0.84
HDAC6-222ENST00000478095 SRPK3Q9UPE1 567 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 KCNE2Q9Y6J6 123 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 EPG5Q9HCE0 2579 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 AHCTF1Q8WYP5 2266 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 ZZEF1O43149 2961 aa9.81□□□□□ -0.84
HDAC6-222ENST00000478095 URB1O60287 2271 aaKnown RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 A0A1B0GX78 115 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 A0A1W2PPM1 405 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 TLDC2A0PJX2 215 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 HYKKA2RU49 373 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 FITM1A5D6W6 292 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 LRRC14BA6NHZ5 514 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 SYCE1LA8MT33 242 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 TERTO14746 1132 aaKnown RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 OR1F1O43749 312 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 LCMT2O60294 686 aaKnown RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 STK16O75716 305 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 HBQ1P09105 142 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 PRKAR1AP10644 381 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 KRT15P19012 456 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 HRH2P25021 359 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 GRK3P35626 688 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 FOXL2P58012 376 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 RPS15AP62244 130 aaKnown RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 SNRPNP63162 240 aaKnown RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 NFKB2Q00653 900 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 VAC14Q08AM6 782 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 CDC16Q13042 620 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 PDK4Q16654 411 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 PFKFB4Q16877 469 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 TSNAXIP1Q2TAA8 658 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 PRTGQ2VWP7 1150 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 ATP1A1-AS1Q5TC04 95 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 ZNF385CQ66K41 422 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 NXPE4Q6UWF7 544 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 FAM198BQ6UWH4 519 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 TIFABQ6ZNK6 161 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 VN1R4Q7Z5H5 301 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 KLHDC8AQ8IYD2 350 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 CYP4X1Q8N118 509 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 ABHD11Q8NFV4 315 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 STARD8Q92502 1023 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 ZBTB9Q96C00 473 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 CABS1Q96KC9 395 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms