RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CSNK1EP49674 416 aaKnown RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 ACADVLP49748 655 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 ZNF132P52740 706 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 NLRP5P59047 1200 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 ZBTB17Q13105 803 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 NAE1Q13564 534 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 FGFBP1Q14512 234 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 ZRSR1Q15695 479 aaKnown RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 ZNF77Q15935 545 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 GSTA3Q16772 222 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 XKR4Q5GH76 650 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 PLA2G4FQ68DD2 849 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 PLEKHA7Q6IQ23 1121 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 ACAD10Q6JQN1 1059 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 METTL2BQ6P1Q9 378 aaKnown RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 ALKAL1Q6UXT8 129 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 KRBA2Q6ZNG9 492 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 MMS22LQ6ZRQ5 1243 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 Q6ZTC4 211 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 TMTC3Q6ZXV5 915 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 TUBA1AQ71U36 451 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 HAPLN4Q86UW8 402 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 SATL1Q86VE3 508 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 CDR2LQ86X02 465 aaPredicted RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 ZBTB8OSQ8IWT0 167 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 SPATA6LQ8N4H0 392 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 ATAD1Q8NBU5 361 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 EXOC6Q8TAG9 804 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 CCDC12Q8WUD4 166 aaPredicted RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 SECTM1Q8WVN6 248 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 SGF29Q96ES7 293 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 TMEM19Q96HH6 336 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 METTL2AQ96IZ6 378 aaKnown RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 FAM20AQ96MK3 541 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 PGLYRP2Q96PD5 576 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 CCNL2Q96S94 520 aaPredicted RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 TUBA1CQ9BQE3 449 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 NUP58Q9BVL2 599 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 ADNPQ9H2P0 1102 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 LINC00597Q9H2U6 94 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 NDST4Q9H3R1 872 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 PCDH9Q9HC56 1237 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 HINT3Q9NQE9 182 aaKnown RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 PCDHB16Q9NRJ7 776 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 SLC6A13Q9NSD5 602 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 DONSONQ9NYP3 566 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 UXTQ9UBK9 157 aaPredicted RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 KCNS2Q9ULS6 477 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 VDAC3Q9Y277 283 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 AAR2Q9Y312 384 aaKnown RBP4.45□□□□□ -1.7
VPS50-214ENST00000477935 PSAT1Q9Y617 370 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 OTOGQ6ZRI0 2925 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 KIF26BQ2KJY2 2108 aa4.45□□□□□ -1.7
VPS50-214ENST00000477935 SPENQ96T58 3664 aaKnown RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 TRAV19A0A0A6YYK7 116 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 A0A1B0GTQ1 180 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 MTMR11A4FU01 709 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 ZNF587BE7ETH6 402 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 F7P08709 466 aaPredicted RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 CSH1P0DML2 217 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 CSH2P0DML3 217 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 KCNE1P15382 129 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 CKMT2P17540 419 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 DDIT3P35638 169 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 HARS2P49590 506 aaKnown RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 EIF3BP55884 814 aaKnown RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 DNAJC3Q13217 504 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 PRPF4BQ13523 1007 aaKnown RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 E2F5Q15329 346 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 IGFBP7Q16270 282 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 ALFQ53S48 1182 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 GLRA4Q5JXX5 417 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 FHL5Q5TD97 284 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 GGNBP1Q5YKI7 109 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 CASC1Q6TDU7 716 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 ZNF771Q7L3S4 317 aaPredicted RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 TMEM150AQ86TG1 271 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 EXOC3L1Q86VI1 746 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 POC1AQ8NBT0 407 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 ZNF564Q8TBZ8 553 aaPredicted RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 FIG4Q92562 907 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 GTF3C6Q969F1 213 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 SH3GL2Q99962 352 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 GPR174Q9BXC1 333 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 ZMYND12Q9H0C1 365 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 C2orf40Q9H1Z8 148 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 PDZD7Q9H5P4 517 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 PREBQ9HCU5 417 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 MMP25Q9NPA2 562 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 RBM28Q9NW13 759 aaKnown RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 INTS6Q9UL03 887 aaKnown RBP4.44□□□□□ -1.7
VPS50-214ENST00000477935 CEPT1Q9Y6K0 416 aa4.44□□□□□ -1.7
VPS50-214ENST00000477935 PLXND1Q9Y4D7 1925 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 AKR1B15C9JRZ8 316 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 SH2B2O14492 632 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 FTCDO95954 541 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 IGLV3-19P01714 112 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 UBL4AP11441 157 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 HMGA1P17096 107 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms