RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 Q6ZS92 163 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 OVCH1Q7RTY7 1134 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 PEX26Q7Z412 305 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 KIAA1328Q86T90 577 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 CREG2Q8IUH2 290 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 DNAJC22Q8N4W6 341 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 Q8NA96 180 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 OR5AR1Q8NGP9 310 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 DNAJB14Q8TBM8 379 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 PPM1MQ96MI6 270 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 LMF1Q96S06 567 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 CARD6Q9BX69 1037 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 LHPPQ9H008 270 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 SPRTNQ9H040 489 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-214ENST00000477152 ASF1BQ9NVP2 202 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 EURLQ9NYK6 297 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 LUZP4Q9P127 313 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 TNPO3Q9Y5L0 923 aaKnown RBP6.96□□□□□ -1.3
BRCA1-214ENST00000477152 ANKRD12Q6UB98 2062 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 hCG_2014768A0A024R1R8 64 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 SLC5A10A0PJK1 596 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 A1L4Q6 167 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF839A8K0R7 811 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 PHF2O75151 1096 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ERVK-10P10266 1014 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CXCR2P25025 360 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ADRA1DP25100 572 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ACADLP28330 430 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 TSFMP43897 325 aaKnown RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 TTPAP49638 278 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CDC16Q13042 620 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 RAPSNQ13702 412 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 SPARCL1Q14515 664 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 BRD3Q15059 726 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 PRMT9Q6P2P2 845 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 MTFR2Q6P444 385 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 C4orf22Q6V702 233 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 TTLL10Q6ZVT0 673 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 LRRC6Q86X45 466 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 KLHDC8BQ8IXV7 354 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 LILRA3Q8N6C8 439 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CLDN19Q8N6F1 224 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 PPHLN1Q8NEY8 458 aaKnown RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 SUN3Q8TAQ9 357 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 RAD51AP1Q96B01 352 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 PANX2Q96RD6 677 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 RANBP9Q96S59 729 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 SELENOSQ9BQE4 189 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 SLC26A1Q9H2B4 701 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF552Q9H707 407 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 DHCR7Q9UBM7 475 aaKnown RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 GNPTGQ9UJJ9 305 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 EPN1Q9Y6I3 576 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 BOD1L1Q8NFC6 3051 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 PCM1Q15154 2024 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 NBASA2RRP1 2371 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CCDC88CQ9P219 2028 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 DYTNA2CJ06 578 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 WIPF3A6NGB9 483 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 TXNDC9O14530 226 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 MAP2K7O14733 419 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 VPS26AO75436 327 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 USP1O94782 785 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF205O95201 554 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 MLYCDO95822 493 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ONECUT2O95948 504 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 LDLRP01130 860 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ESR1P03372 595 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ICAM2P13598 275 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 FOSL1P15407 271 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 TPH1P17752 444 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CD9P21926 228 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 PKLRP30613 574 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CA5AP35218 305 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 HSPA14Q0VDF9 509 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 KIF5AQ12840 1032 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 TBX2Q13207 712 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF169Q14929 603 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 INAQ16352 499 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 SEL1L2Q5TEA6 688 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 KCTD11Q693B1 232 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 PTRHD1Q6GMV3 140 aaKnown RBP6.95□□□□□ -1.3
BRCA1-214ENST00000477152 ISLR2Q6UXK2 745 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 SLC22A15Q8IZD6 547 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 FAM71DQ8N9W8 422 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 OR2L8Q8NGY9 312 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 OR4L1Q8NH43 312 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CCDC140Q96MF4 163 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CUTCQ9NTM9 273 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 CDYLQ9Y232 598 aa6.95□□□□□ -1.3
BRCA1-214ENST00000477152 SPTBP11277 2137 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 SEC16AO15027 2179 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 MROH6A6NGR9 719 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 GOLGA6L6A8MZA4 724 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 H3BMM5 538 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 RASGRF2O14827 1237 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 HNRNPRO43390 633 aaKnown RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 CCNDBP1O95273 360 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 HPP00738 406 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 PSMA3P25788 255 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms