RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 C6orf141Q5SZD1 244 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ACSM2BQ68CK6 577 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 AGTRAPQ6RW13 159 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 VITQ6UXI7 678 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 SFTPA1Q8IWL2 248 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 NRSN1Q8IZ57 195 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ARL10Q8N8L6 244 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 GLYATL1Q969I3 302 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 MAGED4Q96JG8 741 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 FOPNLQ96NB1 174 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 PLA2G2FQ9BZM2 168 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 UTS2RQ9UKP6 389 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 LOC100130705A0A1B0GUX0 176 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 SLC5A10A0PJK1 596 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 SLC16A6O15403 523 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 NOBOXO60393 691 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 SCN2BO60939 215 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 SRPRAP08240 638 aaKnown RBP15.9■□□□□ 0.14
TMEM53-208ENST00000476724 COX7A2P14406 83 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 TMBIM6P55061 237 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 LAPTM5Q13571 262 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 UGT8Q16880 541 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 GPR107Q5VW38 600 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 CPZQ66K79 652 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 SHQ1Q6PI26 577 aaKnown RBP15.9■□□□□ 0.14
TMEM53-208ENST00000476724 CROCCP3Q8IVE0 287 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 ZDHHC21Q8IVQ6 265 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 C10orf111Q8N326 155 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 OR13F1Q8NGS4 319 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 SPATA9Q9BWV2 254 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 AMBRA1Q9C0C7 1298 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 ADNPQ9H2P0 1102 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 EPHX3Q9H6B9 360 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 GDE1Q9NZC3 331 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 STOX2Q9P2F5 926 aaPredicted RBP15.9■□□□□ 0.14
TMEM53-208ENST00000476724 PCDHGA8Q9Y5G5 932 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 KIAA1549LQ6ZVL6 1849 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 MAGEB17A8MXT2 336 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 H3BMQ9 156 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 PSMD11O00231 422 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 HS6ST1O60243 411 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 NFATC1O95644 943 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 CTSLP07711 333 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 ENGP17813 658 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 CD22P20273 847 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 GSTM2P28161 218 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 RYKP34925 604 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 PNLIPRP1P54315 467 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 CTBSQ01459 385 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 DLX2Q07687 328 aaPredicted RBP15.9■□□□□ 0.14
TMEM53-208ENST00000476724 NAE1Q13564 534 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 NEDD8Q15843 81 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 VMACQ2NL98 169 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 LRRC23Q53EV4 343 aaPredicted RBP15.9■□□□□ 0.14
TMEM53-208ENST00000476724 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.9■□□□□ 0.14
TMEM53-208ENST00000476724 ERAP2Q6P179 960 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 DCP2Q8IU60 420 aaKnown RBP15.9■□□□□ 0.14
TMEM53-208ENST00000476724 RASGEF1AQ8N9B8 481 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 OR56A3Q8NH54 315 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 C11orf24Q96F05 449 aaPredicted RBP15.9■□□□□ 0.14
TMEM53-208ENST00000476724 COG8Q96MW5 612 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 MYADMQ96S97 322 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 GABARAPL1Q9H0R8 117 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 TRPV4Q9HBA0 871 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 IL1RAPQ9NPH3 570 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 CIDEBQ9UHD4 219 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 GMEB1Q9Y692 573 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 AP1M2Q9Y6Q5 423 aa15.9■□□□□ 0.14
TMEM53-208ENST00000476724 TCF20Q9UGU0 1960 aaKnown RBP15.89■□□□□ 0.14
TMEM53-208ENST00000476724 ANTXRLA6NF34 631 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 E7EQ34 232 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 TSPAN6O43657 245 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 DNAJB5O75953 348 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 SEC14L2O76054 403 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 KCNK5O95279 499 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 PPIBP23284 216 aaKnown RBP15.89■□□□□ 0.13
TMEM53-208ENST00000476724 WNT3P56703 355 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 LRRC74AQ0VAA2 488 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 TMEM115Q12893 351 aaPredicted RBP15.89■□□□□ 0.13
TMEM53-208ENST00000476724 ZCCHC8Q6NZY4 707 aaKnown RBP15.89■□□□□ 0.13
TMEM53-208ENST00000476724 ZNF621Q6ZSS3 439 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 TMEM26Q6ZUK4 368 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 R3HCC1LQ7Z5L2 792 aaKnown RBP15.89■□□□□ 0.13
TMEM53-208ENST00000476724 HS3ST5Q8IZT8 346 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 KIAA1958Q8N8K9 716 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 CHDHQ8NE62 594 aaPredicted RBP15.89■□□□□ 0.13
TMEM53-208ENST00000476724 VPS37AQ8NEZ2 397 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 OR7A2PQ8NGA2 310 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 PHF12Q96QT6 1004 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 EBPLQ9BY08 206 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 TM9SF3Q9HD45 589 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 CLEC1BQ9P126 229 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 CORO2BQ9UQ03 480 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 SLC27A6Q9Y2P4 619 aa15.89■□□□□ 0.13
TMEM53-208ENST00000476724 MUC22E2RYF6 1773 aaPredicted RBP15.89■□□□□ 0.13
TMEM53-208ENST00000476724 UGT2B11O75310 529 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 ITGAMP11215 1152 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 VEZF1Q14119 521 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 SPIDRQ14159 915 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 E2F2Q14209 437 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms