RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 MKKSQ9NPJ1 570 aaPredicted RBP10.26□□□□□ -0.77
SEC13-214ENST00000476597 CCDC177Q9NQR7 707 aaPredicted RBP10.26□□□□□ -0.77
SEC13-214ENST00000476597 TRPC4Q9UBN4 977 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 VWA7Q9Y334 891 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 TEX264Q9Y6I9 313 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 UNC79Q9P2D8 2635 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 TNRC6AQ8NDV7 1962 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 TEX15Q9BXT5 2789 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 A0A0A6YYC8 382 aaPredicted RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 A0A1W2PQ72 361 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 IDSB3KWA1 339 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 I3L1I5 382 aaPredicted RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 MAP2K7O14733 419 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 FFAR3O14843 346 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 TP73O15350 636 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 GPR42O15529 346 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 P2RX6O15547 441 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 ANXA5P08758 320 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 HIST1H2AGP0C0S8 130 aaPredicted RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 ACPPP15309 386 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 NPPBP16860 134 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 HIST1H2ADP20671 130 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 CCND1P24385 295 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 ITGA8P53708 1063 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 IL2P60568 153 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 RPS15AP62244 130 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 TBPL1P62380 186 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 SNRPNP63162 240 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 CSNK1G2P78368 415 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 CBLBQ13191 982 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 NAE1Q13564 534 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 NDUFA9Q16795 377 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 PHKG1Q16816 387 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 EIF2S3LQ2VIR3 472 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 HP1BP3Q5SSJ5 553 aaPredicted RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 FHL5Q5TD97 284 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 HECTD2Q5U5R9 776 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 IRAK1BP1Q5VVH5 260 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 STEAP4Q687X5 459 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 TRMT10BQ6PF06 316 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 LCTLQ6UWM7 567 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 MBOAT1Q6ZNC8 495 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 CUZD1Q86UP6 607 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 DNAJB14Q8TBM8 379 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 PPP4R1Q8TF05 950 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 LINGO1Q96FE5 620 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 THOC3Q96J01 351 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 HIST1H2AHQ96KK5 128 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 LMF1Q96S06 567 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 BARD1Q99728 777 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 NAPGQ99747 312 aaPredicted RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 HIST1H2AJQ99878 128 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 WDR77Q9BQA1 342 aaPredicted RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 WDR83Q9BRX9 315 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 H2AFJQ9BTM1 129 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 SGPP1Q9BX95 441 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 SLC29A3Q9BZD2 475 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 DRC3Q9H069 523 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 ILKAPQ9H0C8 392 aaPredicted RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 ZNF160Q9HCG1 818 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 PPANQ9NQ55 473 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 C14orf105Q9NVL8 296 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 ASF1BQ9NVP2 202 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 SLC17A6Q9P2U8 582 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 RNF14Q9UBS8 474 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 CORO1CQ9ULV4 474 aaPredicted RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 CHMP2BQ9UQN3 213 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 SH2B3Q9UQQ2 575 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 MRPS2Q9Y399 296 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 PCDHGA10Q9Y5H3 936 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 COPG1Q9Y678 874 aaKnown RBP10.25□□□□□ -0.77
SEC13-214ENST00000476597 NOTCH2Q04721 2471 aa10.25□□□□□ -0.77
SEC13-214ENST00000476597 H0YIG0 161 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 CCDC188H7C350 402 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 PCDH17O14917 1159 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 TTI1O43156 1089 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 LCMT2O60294 686 aaKnown RBP10.24□□□□□ -0.77
SEC13-214ENST00000476597 KLHL18O94889 574 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 SEC31AO94979 1220 aaKnown RBP10.24□□□□□ -0.77
SEC13-214ENST00000476597 NSA2O95478 260 aaKnown RBP10.24□□□□□ -0.77
SEC13-214ENST00000476597 CBX6O95503 412 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 HEXBP07686 556 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 COX6A1P12074 109 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 FDXRP22570 491 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 CXCR2P25025 360 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 PAFAH1B1P43034 410 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 AVPR1BP47901 424 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 GLRBP48167 497 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 PGGT1BP53609 377 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 ARL4CP56559 192 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 MAT1AQ00266 395 aaKnown RBP10.24□□□□□ -0.77
SEC13-214ENST00000476597 MRPL49Q13405 166 aaKnown RBP10.24□□□□□ -0.77
SEC13-214ENST00000476597 PDAP1Q13442 181 aaKnown RBP10.24□□□□□ -0.77
SEC13-214ENST00000476597 HIF1AQ16665 826 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 SYT16Q17RD7 645 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 CAPN13Q6MZZ7 669 aaPredicted RBP10.24□□□□□ -0.77
SEC13-214ENST00000476597 TMEM205Q6UW68 189 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 C17orf64Q86WR6 236 aa10.24□□□□□ -0.77
SEC13-214ENST00000476597 ZC3H7AQ8IWR0 971 aaKnown RBP10.24□□□□□ -0.77
SEC13-214ENST00000476597 KBTBD2Q8IY47 623 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms