RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NPEPPSL1A6NEC2 478 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 SUPT3HB4E1H0 165 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 C21orf140B9A014 251 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 SLC16A5O15375 505 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 NPHS1O60500 1241 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 SUPT3HO75486 399 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 SLCO2B1O94956 709 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 TGDSO95455 350 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 ENO2P09104 434 aaPredicted RBP15.03■□□□□ -0
CPSF3-203ENST00000475482 SBK3P0C264 359 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 GFAPP14136 432 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 ST6GAL1P15907 406 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 CDH3P22223 829 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 DLSTP36957 453 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 SLC1A6P48664 564 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 ARL4DP49703 201 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 ABCE1P61221 599 aaKnown RBP15.03■□□□□ -0
CPSF3-203ENST00000475482 GBX1Q14549 363 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 TSNQ15631 228 aaKnown RBP15.03■□□□□ -0
CPSF3-203ENST00000475482 GPR19Q15760 415 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 ACSBG2Q5FVE4 666 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 CDKL4Q5MAI5 379 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 TMTC4Q5T4D3 741 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 NAPRTQ6XQN6 538 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 FAM47EQ6ZV65 393 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 ZNF473Q8WTR7 871 aaKnown RBP15.03■□□□□ -0
CPSF3-203ENST00000475482 SKA2Q8WVK7 121 aaPredicted RBP15.03■□□□□ -0
CPSF3-203ENST00000475482 RNF31Q96EP0 1072 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 CNDP1Q96KN2 507 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 FOPNLQ96NB1 174 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 TRAPPC9Q96Q05 1148 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 SIKE1Q9BRV8 207 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 HGH1Q9BTY7 390 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 TRMOQ9BU70 441 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 MENTQ9BUN1 341 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 FAM117AQ9C073 453 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 CHRNA10Q9GZZ6 450 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 XKR8Q9H6D3 395 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 EML4Q9HC35 981 aaKnown RBP15.03■□□□□ -0
CPSF3-203ENST00000475482 NUDT4Q9NZJ9 180 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 OR6C2Q9NZP2 312 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 POLG2Q9UHN1 485 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 KCND3Q9UK17 655 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 ASF1AQ9Y294 204 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 PCDHB3Q9Y5E6 796 aa15.03■□□□□ -0
CPSF3-203ENST00000475482 MED13Q9UHV7 2174 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 GSAPA4D1B5 854 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 A8MT66 165 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 C2orf74A8MZ97 194 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 CDC7O00311 574 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 SNNO75324 88 aaPredicted RBP15.02■□□□□ -0
CPSF3-203ENST00000475482 HSPA4LO95757 839 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 NTRK1P04629 796 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 HIST1H2AGP0C0S8 130 aaPredicted RBP15.02■□□□□ -0
CPSF3-203ENST00000475482 CCNYL3P0C7X3 344 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 TCN2P20062 427 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 HIST1H2ADP20671 130 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 IMPDH1P20839 514 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 CYP2A7P20853 494 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 SHMT2P34897 504 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 CCR10P46092 362 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 HK2P52789 917 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 ALDH18A1P54886 795 aaKnown RBP15.02■□□□□ -0
CPSF3-203ENST00000475482 POLE2P56282 527 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 DNASE1L3Q13609 305 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 OR4D1Q15615 310 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 VRK3Q8IV63 474 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 SLC38A9Q8NBW4 561 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 CT55Q8WUE5 264 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 L3HYPDHQ96EM0 354 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 HIST1H2AHQ96KK5 128 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 OR2A14Q96R47 310 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 HIST1H2AJQ99878 128 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 H2AFJQ9BTM1 129 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 TRIM55Q9BYV6 548 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 SLC25A18Q9H1K4 315 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 ACTR10Q9NZ32 417 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 CD274Q9NZQ7 290 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 OARD1Q9Y530 152 aa15.02■□□□□ -0
CPSF3-203ENST00000475482 TNPO3Q9Y5L0 923 aaKnown RBP15.02■□□□□ -0
CPSF3-203ENST00000475482 ANKRD12Q6UB98 2062 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 PIPSLA2A3N6 862 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 H3BMH7 237 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 STX16-NPEPL1H3BU86 382 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 STX16O14662 325 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 CPNE3O75131 537 aaKnown RBP15.01□□□□□ -0.01
CPSF3-203ENST00000475482 SCRG1O75711 98 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 CHRM5P08912 532 aaPredicted RBP15.01□□□□□ -0.01
CPSF3-203ENST00000475482 FURINP09958 794 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 RORAP35398 523 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 GABRA4P48169 554 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 NAGLUP54802 743 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 HERVK_113P63132 956 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 OCRLQ01968 901 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 ABRQ12979 859 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 RCN2Q14257 317 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 GRB7Q14451 532 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 TGFBIQ15582 683 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 METTL2BQ6P1Q9 378 aaKnown RBP15.01□□□□□ -0.01
CPSF3-203ENST00000475482 SPESP1Q6UW49 350 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms