RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 A0A1W2PPV9 198 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ERICH4A6NGS2 130 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 SDHDO14521 159 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 PPM1DO15297 605 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 SIGLEC6O43699 453 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 RSL1D1O76021 490 aaKnown RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 WFS1O76024 890 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 IDO1P14902 403 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 EPORP19235 508 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 MAGP20916 626 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ZNF10P21506 573 aaPredicted RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 PTX3P26022 381 aaPredicted RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 PIK3CBP42338 1070 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 MLLT3P42568 568 aaPredicted RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 HTR6P50406 440 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ERVK-8P63133 956 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 RPL38P63173 70 aaKnown RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 CYP4F2P78329 520 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 SQLEQ14534 574 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 MAPRE2Q15555 327 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ZSCAN26Q16670 478 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 GSTA3Q16772 222 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 AP5B1Q2VPB7 878 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 LSM12Q3MHD2 195 aaKnown RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 SPIN4Q56A73 249 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ZC3H12BQ5HYM0 836 aaKnown RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 TCHHL1Q5QJ38 904 aaPredicted RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 FIGLAQ6QHK4 219 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 RNF165Q6ZSG1 346 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 TRPM8Q7Z2W7 1104 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 PAGE2Q7Z2X7 111 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 MTDHQ86UE4 582 aaKnown RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ALYREFQ86V81 257 aaKnown RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 LAS2Q8IYD9 372 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ABHD11Q8NFV4 315 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 OR7G3Q8NG95 312 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 HUS1BQ8NHY5 278 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 RSC1A1Q92681 617 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 USP7Q93009 1102 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ZUFSPQ96AP4 578 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 CCDC74AQ96AQ1 378 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 CMTM7Q96FZ5 175 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 APOLD1Q96LR9 279 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 CATSPER2Q96P56 530 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 QRFPRQ96P65 431 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 TGM7Q96PF1 710 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 DPYSL5Q9BPU6 564 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 TUBB6Q9BUF5 446 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 EDEM2Q9BV94 578 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 SMOC1Q9H4F8 434 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 NT5DC2Q9H857 520 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 AKTIPQ9H8T0 292 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 COPS7BQ9H9Q2 264 aaPredicted RBP9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 IL21RQ9HBE5 538 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 TNFRSF12AQ9NP84 129 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 TMEM9BQ9NQ34 198 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 C1orf109Q9NX04 203 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 VPS29Q9UBQ0 182 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 FTSJ1Q9UET6 329 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 ZNF225Q9UK10 706 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 POMT2Q9UKY4 750 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 TMED5Q9Y3A6 229 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 PCDHGB2Q9Y5G2 931 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 SDK1Q7Z5N4 2213 aa9.87□□□□□ -0.83
PRPF38A-202ENST00000474048 A0A1B0GTL3 188 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 FEZF1A0PJY2 475 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 TLCD2A6NGC4 264 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 FOXE1O00358 373 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 FCHO1O14526 889 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 HAT1O14929 419 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 CAPN5O15484 640 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 NDUFS4O43181 175 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 LRP3O75074 770 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 LDOC1O95751 146 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 LMNAP02545 664 aaKnown RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 ZNF806P0C7X5 589 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 PNLIPP16233 465 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 DDX5P17844 614 aaKnown RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 AHRP35869 848 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 NEK2P51955 445 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 STXBP1P61764 594 aaKnown RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SKP1P63208 163 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 CSNK1G2P78368 415 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 MXRA7P84157 204 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 HMGCS1Q01581 520 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 CYP4F3Q08477 520 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SHBQ15464 509 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 CACNA1EQ15878 2313 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 ZXDCQ2QGD7 858 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SMU1Q2TAY7 513 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 UGT3A2Q3SY77 523 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 XKR7Q5GH72 579 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 TMTC4Q5T4D3 741 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 KIAA1614Q5VZ46 1190 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 TCEAL6Q6IPX3 200 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 FAM92BQ6ZTR7 304 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 MAVSQ7Z434 540 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 TRIM46Q7Z4K8 759 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 TRIM73Q86UV7 250 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 C17orf82Q86X59 251 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms