RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CROCCP3Q8IVE0 287 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 LAS2Q8IYD9 372 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 ZZZ3Q8IYH5 903 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 FAM86B1Q8N7N1 296 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 OR9A1PQ8NGU1 263 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 OR2T29Q8NH02 315 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 SORCS1Q8WY21 1168 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 ISOC1Q96CN7 298 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 NUS1Q96E22 293 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 MTERF3Q96E29 417 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 EGLN2Q96KS0 407 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 ZSWIM3Q96MP5 696 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 SGPP1Q9BX95 441 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 RAD21L1Q9H4I0 556 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 POLR1BQ9H9Y6 1135 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 DYRK4Q9NR20 520 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 SLC6A13Q9NSD5 602 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 DEC1Q9P2X7 70 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 ATXN10Q9UBB4 475 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 ATP6V1HQ9UI12 483 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 VPS4AQ9UN37 437 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 WBP11Q9Y2W2 641 aaKnown RBP10.27□□□□□ -0.77
APLF-204ENST00000471727 ANKRD12Q6UB98 2062 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 PIKFYVEQ9Y2I7 2098 aa10.27□□□□□ -0.77
APLF-204ENST00000471727 MTCL1Q9Y4B5 1905 aaKnown RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 LOC100130705A0A1B0GUX0 176 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 KLHL33A6NCF5 533 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 TMEM202A6NGA9 273 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 LZTS3O60299 673 aaPredicted RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 MRPS14O60783 128 aaKnown RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 FKBP9O95302 570 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 CLIC3O95833 236 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 FABP3P05413 133 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 CCDC159P0C7I6 412 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 C1GALT1C1LP0DN25 315 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 FPR1P21462 350 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 CRHBPP24387 322 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 EEF1B2P24534 225 aaKnown RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 GSTM2P28161 218 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 TIA1P31483 386 aaKnown RBP eCLIP10.26□□□□□ -0.77
APLF-204ENST00000471727 HSD17B2P37059 387 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 PIK3CBP42338 1070 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 GPR1P46091 355 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 PREPP48147 710 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 TMBIM6P55061 237 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 NTHL1P78549 312 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 RBBP4Q09028 425 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 KCNAB2Q13303 367 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 ELAVL3Q14576 367 aaKnown RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 PLCL1Q15111 1095 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 TMEM240Q5SV17 173 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 C6orf141Q5SZD1 244 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 DCP2Q8IU60 420 aaKnown RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 NPAS3Q8IXF0 933 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 ETFBKMTQ8IXQ9 262 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 NATD1Q8N6N6 113 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 OR7A2PQ8NGA2 310 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 GOT1L1Q8NHS2 421 aaPredicted RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 ZNF480Q8WV37 535 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 HERVK_113Q902F9 699 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 SNX19Q92543 992 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 ZNF566Q969W8 418 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 ZNF707Q96C28 371 aaPredicted RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 OR4K3Q96R72 315 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 MTERF1Q99551 399 aaKnown RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 MTIF3Q9H2K0 278 aaKnown RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 TPT1P8Q9HAU6 139 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 OBP2AQ9NY56 170 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 DNMT3AQ9Y6K1 912 aaPredicted RBP10.26□□□□□ -0.77
APLF-204ENST00000471727 PLXNA2O75051 1894 aa10.26□□□□□ -0.77
APLF-204ENST00000471727 TRIM64BA6NI03 449 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 GABRR3A8MPY1 467 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 C1QTNF3-AMACRE9PGA6 284 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 HS6ST1O60243 411 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 LILRB5O75023 590 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 PAPLNO95428 1278 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 CPSF4O95639 269 aaKnown RBP10.25□□□□□ -0.77
APLF-204ENST00000471727 IDSP22304 550 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 PTX3P26022 381 aaPredicted RBP10.25□□□□□ -0.77
APLF-204ENST00000471727 IRS1P35568 1242 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 BDKRB1P46663 353 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 CXCR4P61073 352 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 PMS2P3Q13401 168 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 DCTN2Q13561 401 aaKnown RBP10.25□□□□□ -0.77
APLF-204ENST00000471727 DDX39BQ13838 428 aaKnown RBP10.25□□□□□ -0.77
APLF-204ENST00000471727 KEAP1Q14145 624 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 GRIN2CQ14957 1233 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 RAB39AQ14964 217 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 FNDC3BQ53EP0 1204 aaKnown RBP10.25□□□□□ -0.77
APLF-204ENST00000471727 ZNF648Q5T619 568 aaPredicted RBP10.25□□□□□ -0.77
APLF-204ENST00000471727 C9orf64Q5T6V5 341 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 ZNF691Q5VV52 312 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 SYTL1Q8IYJ3 562 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 CFAP206Q8IYR0 622 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 SYNPOQ8N3V7 929 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 C1orf52Q8N6N3 182 aaKnown RBP10.25□□□□□ -0.77
APLF-204ENST00000471727 PIK3C3Q8NEB9 887 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 OR2L2Q8NH16 312 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 HUS1BQ8NHY5 278 aa10.25□□□□□ -0.77
APLF-204ENST00000471727 C12orf43Q96C57 262 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms