RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 JAK1P23458 1154 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 UFM1P61960 85 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 RPL38P63173 70 aaKnown RBP16.86■□□□□ 0.29
HSPG2-208ENST00000471322 HMGCS1Q01581 520 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 FOXM1Q08050 763 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 CSTF3Q12996 717 aaKnown RBP16.86■□□□□ 0.29
HSPG2-208ENST00000471322 EIF2B5Q13144 721 aaKnown RBP16.86■□□□□ 0.29
HSPG2-208ENST00000471322 DOC2AQ14183 400 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 E2F2Q14209 437 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 VPS26BQ4G0F5 336 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 PARGQ86W56 976 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 HPS6Q86YV9 775 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 TBC1D21Q8IYX1 336 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 GLB1L3Q8NCI6 653 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-208ENST00000471322 PHC3Q8NDX5 983 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 OR5K2Q8NHB8 316 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 OR4K3Q96R72 315 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 ACPTQ9BZG2 426 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 EHD1Q9H4M9 534 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 ERVMER34-1Q9H9K5 563 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 SPAG4Q9NPE6 437 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 POMPQ9Y244 141 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 PCDHGA7Q9Y5G6 932 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 CCDC154A6NI56 674 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 E7ENX8 843 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 TOR1BO14657 336 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 FKBP6O75344 327 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PDE5AO76074 875 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PSMG1O95456 288 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PRPS2P11908 318 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 ME2P23368 584 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 TBPL1P62380 186 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 YPEL5P62699 121 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 TAP2Q03519 686 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PYCR3Q53H96 274 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PAGE2BQ5JRK9 111 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 CAPRIN2Q6IMN6 1127 aaKnown RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 AAGABQ6PD74 315 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 CHST15Q7LFX5 561 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 DCP2Q8IU60 420 aaKnown RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 NAXDQ8IW45 347 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 RAB42Q8N4Z0 105 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 FAM174AQ8TBP5 190 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PROKR1Q8TCW9 393 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 MTFMTQ96DP5 389 aaKnown RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 WDR34Q96EX3 536 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 HAUS8Q9BT25 410 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 EFCAB11Q9BUY7 163 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SLC52A3Q9NQ40 469 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 CCDC177Q9NQR7 707 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SPATA7Q9P0W8 599 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 MOSPD1Q9UJG1 213 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 LEF1Q9UJU2 399 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 E7EQ34 232 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PRAMEF4O60810 478 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 EEDO75530 441 aaKnown RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 ACP5P13686 325 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 NPPBP16860 134 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 JUNDP17535 347 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 CAPN3P20807 821 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SDHBP21912 280 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 IDSP22304 550 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 EPHA8P29322 1005 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SLC14A1Q13336 389 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 LAPTM5Q13571 262 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PUM1Q14671 1186 aaKnown RBP eCLIP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 NFATC4Q14934 902 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 HIST2H2ACQ16777 129 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SPATS1Q496A3 300 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SAMD4BQ5PRF9 694 aaKnown RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PRAMEF9Q5VWM5 478 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 HIST2H2AA3Q6FI13 130 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 C8orf82Q6P1X6 216 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SLCO4C1Q6ZQN7 724 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 HID1Q8IV36 788 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 LRRC56Q8IYG6 542 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PPFIBP2Q8ND30 876 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SPDYE1Q8NFV5 336 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 RHBDD1Q8TEB9 315 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 SAP25Q8TEE9 199 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PDXPQ96GD0 296 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 PCBD2Q9H0N5 130 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 BRF2Q9HAW0 419 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 ADA2Q9NZK5 511 aa16.85■□□□□ 0.29
HSPG2-208ENST00000471322 POLR3HQ9Y535 204 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-208ENST00000471322 TRIM38O00635 465 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 DFNA5O60443 496 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 HTR1BP28222 390 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 RXRGP48443 463 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 CLCNKAP51800 687 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 NEK2P51955 445 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 C1orf61Q13536 156 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 KIAA0040Q15053 153 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 ATG9BQ674R7 924 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 SLC25A45Q8N413 288 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 OR5AR1Q8NGP9 310 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 WDR20Q8TBZ3 569 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 UBE2E3Q969T4 207 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 CCDC124Q96CT7 223 aaKnown RBP16.84■□□□□ 0.29
HSPG2-208ENST00000471322 FGF22Q9HCT0 170 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms