RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TCF20Q9UGU0 1960 aaKnown RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 MYO10Q9HD67 2058 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 A0A0G2JN53 185 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 TBC1D3BA6NDS4 549 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 J3QRK9 145 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ZNF701M0R085 212 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 YY2O15391 372 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 MITFO75030 526 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ALBP02768 609 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 OPN1SWP03999 348 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 CYP17A1P05093 508 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 GPIP06744 558 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 LAMP1P11279 417 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 VIPR1P32241 457 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 RCVRNP35243 200 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 MC1RQ01726 317 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 KIAA0040Q15053 153 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 FAM98BQ52LJ0 330 aaKnown RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NOXRED1Q6NXP6 359 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ZNF551Q7Z340 670 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 TMEM179BQ7Z7N9 219 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 VN1R2Q8NFZ6 395 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 FBXL8Q96CD0 374 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SLC47A1Q96FL8 570 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 MRGPRX3Q96LB0 322 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 OR4K3Q96R72 315 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 CCDC90BQ9GZT6 254 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NAA50Q9GZZ1 169 aaKnown RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 OR51B5Q9H339 312 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 IL23AQ9NPF7 189 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SMPD3Q9NY59 655 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SNX6Q9UNH7 406 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 VPS13AQ96RL7 3174 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 RECQL5O94762 991 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ATE1O95260 518 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 CA3P07451 260 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 INHBBP09529 407 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 JAK1P23458 1154 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 PTGER1P34995 402 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 GPR1P46091 355 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 BMXP51813 675 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 CTBSQ01459 385 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ACSM2AQ08AH3 577 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ITGADQ13349 1161 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NFE2L1Q14494 772 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NDUFA5Q16718 116 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 TRIM16LQ309B1 348 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ZBED5Q49AG3 693 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 GPR107Q5VW38 600 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 LYPLAL1Q5VWZ2 237 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ACSM2BQ68CK6 577 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 LIPIQ6XZB0 460 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 FAM20CQ8IXL6 584 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 CBARPQ8N350 705 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 OR5AK3PQ8NH89 298 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SNX19Q92543 992 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NEIL2Q969S2 332 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ISG20Q96AZ6 181 aaKnown RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 TAMM41Q96BW9 452 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 CCDC138Q96M89 665 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 BDH2Q9BUT1 245 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NTMT1Q9BV86 223 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 EHD1Q9H4M9 534 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 PALMDQ9NP74 551 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 PNPLA3Q9NST1 481 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 DKK3Q9UBP4 350 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 RAPGEFL1Q9UHV5 662 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SLC8A2Q9UPR5 921 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 ZNF451Q9Y4E5 1061 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 CKAP5Q14008 2032 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 KRBA1A5PL33 1030 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 H3BM21 787 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 RFXAPO00287 272 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 BMP10O95393 424 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 SCGB1D2O95969 90 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 EIF2S1P05198 315 aaKnown RBP9.11□□□□□ -0.95
TOP3A-203ENST00000469739 ADH5P11766 374 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 HTR1EP28566 365 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 SHMT2P34897 504 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 TXNL4AP83876 142 aaKnown RBP9.11□□□□□ -0.95
TOP3A-203ENST00000469739 PON2Q15165 354 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 ATP6AP1Q15904 470 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 ZNF77Q15935 545 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 CRTC2Q53ET0 693 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-203ENST00000469739 CYBRD1Q53TN4 286 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 TMTC4Q5T4D3 741 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 SLC44A2Q8IWA5 706 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-203ENST00000469739 TBC1D21Q8IYX1 336 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 MMP21Q8N119 569 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 GLYATL1Q969I3 302 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 ZNF641Q96N77 438 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-203ENST00000469739 LYSMD1Q96S90 227 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 PKP4Q99569 1192 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 TMEM106CQ9BVX2 250 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 POLR1BQ9H9Y6 1135 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 CLK4Q9HAZ1 481 aaKnown RBP9.11□□□□□ -0.95
TOP3A-203ENST00000469739 ACSL6Q9UKU0 697 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 ERGIC3Q9Y282 383 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 ST14Q9Y5Y6 855 aa9.11□□□□□ -0.95
TOP3A-203ENST00000469739 HELZP42694 1942 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms