RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PDFQ9HBH1 243 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 NOD2Q9HC29 1040 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 PHPT1Q9NRX4 125 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 ETNK2Q9NVF9 386 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 HACD3Q9P035 362 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 LHX3Q9UBR4 397 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 SERGEFQ9UGK8 458 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 MOSPD1Q9UJG1 213 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 TLK1Q9UKI8 766 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 ADAM21Q9UKJ8 722 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 SARDHQ9UL12 918 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 RAI2Q9Y5P3 530 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 FADS3Q9Y5Q0 445 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 CACNA1HO95180 2353 aa6.15□□□□□ -1.43
PTCD3-208ENST00000469585 FANCMQ8IYD8 2048 aa6.15□□□□□ -1.43
PTCD3-208ENST00000469585 MUC3AQ02505 3323 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 TRIOO75962 3097 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 C1orf232A0A0U1RR37 186 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 A0A1B0GVT2 93 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 LNP1A1A4G5 178 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 C2orf81A6NN90 581 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PLK4O00444 970 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 NDC80O14777 642 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 SLC30A4O14863 429 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 CTIFO43310 598 aaKnown RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 LATO43561 262 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 CEP104O60308 925 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PGLSO95336 258 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PAK4O96013 591 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 SLC4A1P02730 911 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PCCBP05166 539 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ITGA2BP08514 1039 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ALPIP09923 528 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ZNF883P0CG24 379 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 CDK4P11802 303 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PRLRP16471 622 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 HLA-DPA1P20036 260 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 IL4RP24394 825 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PPARGP37231 505 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 GPR1P46091 355 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 CLK3P49761 638 aaKnown RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PEX5P50542 639 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 DUSP3P51452 185 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 NOVA1P51513 510 aaKnown RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ARSEP51690 589 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PNLIPRP1P54315 467 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 OTUD4Q01804 1114 aaKnown RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 CDK18Q07002 472 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 DNASE1L3Q13609 305 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PDE1CQ14123 709 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ELOCQ15369 112 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 HLA-BQ31612 363 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 FAM153CQ494X1 144 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 TMEM52BQ4KMG9 183 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ZNF569Q5MCW4 686 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 RAET1GQ6H3X3 334 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ZNF449Q6P9G9 518 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 KYAT3Q6YP21 454 aaKnown RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PPP1R21Q6ZMI0 780 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 DPPA4Q7L190 304 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PARGQ86W56 976 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 TMEM139Q8IV31 216 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 NRSN1Q8IZ57 195 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 TEX26Q8N6G2 289 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PQLC3Q8N755 202 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 FRMD1Q8N878 549 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 GABPB2Q8TAK5 448 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ACTL9Q8TC94 416 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 KRT35Q92764 455 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 KLK6Q92876 244 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 REPS1Q96D71 796 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 QKIQ96PU8 341 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 IL12RB2Q99665 862 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 SORBS1Q9BX66 1292 aaKnown RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 KLK15Q9H2R5 256 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 GOLPH3Q9H4A6 298 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 TRABDQ9H4I3 376 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 STN1Q9H668 368 aaKnown RBP6.14□□□□□ -1.43
PTCD3-208ENST00000469585 WDR26Q9H7D7 661 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 ERVMER34-1Q9H9K5 563 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 SNX15Q9NRS6 342 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 SPASTQ9UBP0 616 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 KLQ9UEF7 1012 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 CHKBQ9Y259 395 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 PLXND1Q9Y4D7 1925 aa6.14□□□□□ -1.43
PTCD3-208ENST00000469585 MUC22E2RYF6 1773 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-208ENST00000469585 GXYLT2A0PJZ3 443 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 TSPAN11A1L157 253 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 CTAGE9A4FU28 777 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 RGSL1A5PLK6 1076 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 ANTXRLA6NF34 631 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 ERI2A8K979 691 aaKnown RBP6.13□□□□□ -1.43
PTCD3-208ENST00000469585 A8MX80 341 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 PGRMC1O00264 195 aaKnown RBP6.13□□□□□ -1.43
PTCD3-208ENST00000469585 FCHO1O14526 889 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 PFDN6O15212 129 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 SUV39H1O43463 412 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 PPFIA2O75334 1257 aa6.13□□□□□ -1.43
PTCD3-208ENST00000469585 TRIM16O95361 564 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms