RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ABATP80404 500 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 MRPS22P82650 360 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 REEP5Q00765 189 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 RHDQ02161 417 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 LIPEQ05469 1076 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 ZNF763Q0D2J5 394 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 CAPRIN1Q14444 709 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 TAF11Q15544 211 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 SPANXN4Q5MJ08 99 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 C6orf10Q5SRN2 563 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 CATSPEREQ5SY80 951 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 ICE2Q659A1 982 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 GALNT18Q6P9A2 607 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 ENPP7Q6UWV6 458 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 TMIGD1Q6UXZ0 262 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 GCNT7Q6ZNI0 430 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 PTRH1Q86Y79 214 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 PQLC1Q8N2U9 271 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 PIAS4Q8N2W9 510 aaPredicted RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 C1orf52Q8N6N3 182 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 TTLQ8NG68 377 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 CLHC1Q8NHS4 586 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 DNAJB14Q8TBM8 379 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 DUS3LQ96G46 650 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 PDXPQ96GD0 296 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 IL17FQ96PD4 163 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 TSSK3Q96PN8 268 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 OR52E6Q96RD3 313 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 KCNH6Q9H252 994 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 VCXQ9H320 206 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 KIR3DX1Q9H7L2 352 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 TRNAU1APQ9NX07 287 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 CMTM6Q9NX76 183 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 PACSIN3Q9UKS6 424 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 PLAGL1Q9UM63 463 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 PCDHB11Q9Y5F2 797 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 SNX13Q9Y5W8 968 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 MDC1Q14676 2089 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 GNG14A0A1W2PPG7 69 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 TCRBV3S1A0A5B6 114 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 POM121BA6NF01 834 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ANKDD1BA6NHY2 528 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 SHISA7A6NL88 538 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 CASQ2O14958 399 aaPredicted RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 SCAMP2O15127 329 aaKnown RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ARPC2O15144 300 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 PCDH7O60245 1069 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 GPIP06744 558 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ANXA4P09525 319 aaPredicted RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 CHRNB1P11230 501 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ACADSP16219 412 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 HOXB6P17509 224 aaKnown RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 PPIBP23284 216 aaKnown RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 PSMA4P25789 261 aaKnown RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 PTX3P26022 381 aaPredicted RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 GRK3P35626 688 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 TRPC1P48995 793 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 GSK3BP49841 420 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 DGKQP52824 942 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 CLDN2P57739 230 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 MS4A2Q01362 244 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 CYP4F3Q08477 520 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ILF3Q12906 894 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 MTAPQ13126 283 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 RPE65Q16518 533 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 LRIF1Q5T3J3 769 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ANXA8L1Q5VT79 327 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 NANOGP8Q6NSW7 305 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 DUS1LQ6P1R4 473 aaKnown RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ABRAXAS1Q6UWZ7 409 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 Q6ZS52 159 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 IKBIPQ70UQ0 350 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 PAGE2Q7Z2X7 111 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 R3HCC1LQ7Z5L2 792 aaKnown RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 CAMKMTQ7Z624 323 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ABI3BPQ7Z7G0 1075 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 PROSER1Q86XN7 944 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 FAM129CQ86XR2 697 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 RIMKLAQ8IXN7 391 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 KIAA2013Q8IYS2 634 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 KRTCAP2Q8N6L1 136 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 FAM156AQ8NDB6 213 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 VPS37AQ8NEZ2 397 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ABHD11Q8NFV4 315 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 CHTF18Q8WVB6 975 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 DNAJC9Q8WXX5 260 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 OR1E3Q8WZA6 343 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 SNX19Q92543 992 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 GTF2H4Q92759 462 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 MTERF3Q96E29 417 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 SLC45A3Q96JT2 553 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 QRFPRQ96P65 431 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 GBP5Q96PP8 586 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 HHIPQ96QV1 700 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 NELL2Q99435 816 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 ZNF184Q99676 751 aaPredicted RBP8.99□□□□□ -0.97
SMC1A-205ENST00000469129 MENTQ9BUN1 341 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 EBPLQ9BY08 206 aa8.99□□□□□ -0.97
SMC1A-205ENST00000469129 PCED1AQ9H1Q7 454 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms