RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 LPGAT1Q92604 370 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 RERGQ96A58 199 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 FAM136AQ96C01 138 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 MTFMTQ96DP5 389 aaKnown RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 SIGLEC12Q96PQ1 595 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 PANX2Q96RD6 677 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 PKP4Q99569 1192 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 HES7Q9BYE0 225 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 TRIM5Q9C035 493 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 GALPQ9UBC7 116 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 PCYOX1Q9UHG3 505 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 ASPDHA6ND91 283 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 TXNDC9O14530 226 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 HAT1O14929 419 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 CLDN14O95500 239 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 PKMP14618 531 aaKnown RBP12.36□□□□□ -0.43
PTPN7-207ENST00000468385 SSTR2P30874 369 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 PNLIPRP1P54315 467 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 RELAQ04206 551 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 TSTA3Q13630 321 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-207ENST00000468385 TUBA3CQ13748 450 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 TYSND1Q2T9J0 566 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 KLHL38Q2WGJ6 581 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 BTBD16Q32M84 506 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 ACSBG2Q5FVE4 666 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 ACER2Q5QJU3 275 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 FCRLBQ6BAA4 426 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 PLAG1Q6DJT9 500 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 TUBA3EQ6PEY2 450 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 NCCRP1Q6ZVX7 275 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-207ENST00000468385 CPEB2Q7Z5Q1 589 aaKnown RBP12.36□□□□□ -0.43
PTPN7-207ENST00000468385 SPPL2CQ8IUH8 684 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 PLD3Q8IV08 490 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 SYCE1Q8N0S2 351 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 PPFIBP2Q8ND30 876 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 MDS2Q8NDY4 140 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 OR9A4Q8NGU2 314 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 METTL21AQ8WXB1 218 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 SCMH1Q96GD3 660 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 HES6Q96HZ4 224 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 MAGED4Q96JG8 741 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 CYTH2Q99418 400 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 NPAS2Q99743 824 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 FRMD8P1Q9BZ68 369 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-207ENST00000468385 PAK5Q9P286 719 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 ZNF148Q9UQR1 794 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 MEMO1Q9Y316 297 aa12.36□□□□□ -0.43
PTPN7-207ENST00000468385 HIVEP1P15822 2718 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 HEATR5BQ9P2D3 2071 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 GOLGA8KD6RF30 607 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 E7ENX8 843 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 FAM227AF5H4B4 570 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 H0YIG0 161 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 GOLGA8TH3BQL2 631 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 TTI1O43156 1089 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 CYC1P08574 325 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 ZSCAN5DPP0CG00 497 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 PTMSP20962 102 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 AVPR1BP47901 424 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 ST13P50502 369 aaKnown RBP12.35□□□□□ -0.43
PTPN7-207ENST00000468385 TAP2Q03519 686 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 KCNJ11Q14654 390 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 NDUFA9Q16795 377 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 KRTCAP3Q53RY4 240 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 CES3Q6UWW8 571 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 PRSS41Q7RTY9 318 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 ANKRD37Q7Z713 158 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 CRLF3Q8IUI8 442 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 LRRC56Q8IYG6 542 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-207ENST00000468385 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 ZNF480Q8WV37 535 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 C1orf54Q8WWF1 131 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 MFSD3Q96ES6 412 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 C14orf79Q96F83 325 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 FRMD6Q96NE9 622 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 IL22Q9GZX6 179 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 TSPAN10Q9H1Z9 355 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-207ENST00000468385 EIF2B3Q9NR50 452 aaKnown RBP12.35□□□□□ -0.43
PTPN7-207ENST00000468385 ANKRD10Q9NXR5 420 aa12.35□□□□□ -0.43
PTPN7-207ENST00000468385 UTP6Q9NYH9 597 aaKnown RBP12.35□□□□□ -0.43
PTPN7-207ENST00000468385 C19orf25Q9UFG5 118 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-207ENST00000468385 OR2W5A6NFC9 320 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 NPIPA5E9PKD4 350 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 H3BMM5 538 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 SMAPO00193 183 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 MAN1A2O60476 641 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 VAPBO95292 243 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 NSA2O95478 260 aaKnown RBP12.34□□□□□ -0.43
PTPN7-207ENST00000468385 SLC16A8O95907 504 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 STATHP02808 62 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 ESR1P03372 595 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 CATP04040 527 aaKnown RBP12.34□□□□□ -0.43
PTPN7-207ENST00000468385 CHRM3P20309 590 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 RPL22P35268 128 aaKnown RBP12.34□□□□□ -0.43
PTPN7-207ENST00000468385 HSD17B2P37059 387 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 CD96P40200 585 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 ADARP55265 1226 aaKnown RBP12.34□□□□□ -0.43
PTPN7-207ENST00000468385 ABATP80404 500 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms