RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MR1Q95460 341 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 SLC7A6OSQ96CW6 309 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-207ENST00000467273 C18orf8Q96DM3 657 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 SCRN2Q96FV2 425 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 RSRC1Q96IZ7 334 aaKnown RBP5.26□□□□□ -1.57
PTCD3-207ENST00000467273 ELMO2Q96JJ3 720 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 TRAPPC9Q96Q05 1148 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 MCCC1Q96RQ3 725 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-207ENST00000467273 RUFY1Q96T51 708 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 TREX2Q9BQ50 279 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-207ENST00000467273 NUDT16L1Q9BRJ7 211 aaKnown RBP5.26□□□□□ -1.57
PTCD3-207ENST00000467273 TUBB2BQ9BVA1 445 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 OR10A2Q9H208 303 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 CHST8Q9H2A9 424 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 CATSPERBQ9H7T0 1116 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 AKIRIN1Q9H9L7 192 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-207ENST00000467273 UBE2TQ9NPD8 197 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-207ENST00000467273 LMBRD1Q9NUN5 540 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTCD3-207ENST00000467273 DNPEPQ9ULA0 475 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 HPSEQ9Y251 543 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 GPR52Q9Y2T5 361 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 SLC30A1Q9Y6M5 507 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 PCM1Q15154 2024 aa5.26□□□□□ -1.57
PTCD3-207ENST00000467273 FAM237AA0A1B0GTK4 181 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 TLCD2A6NGC4 264 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 C9J4A7 227 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 FAM72CH0Y354 149 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 BOLA2-SMG1P6H3BVE0 249 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 SKAP2O75563 359 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 TIPRLO75663 272 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PALMO75781 387 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 LSM8O95777 96 aaKnown RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 SOD1P00441 154 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 VIPP01282 170 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 CAPN1P07384 714 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 HBQ1P09105 142 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 VSIG10L2P0DP72 767 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 MTHFD1P11586 935 aaKnown RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 FOLR1P15328 257 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PFKFB1P16118 471 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 ZNF30P17039 623 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 MALP21145 153 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 FPR1P21462 350 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PAX7P23759 505 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 EPHB2P29323 1055 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PTPN7P35236 360 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 HSPA9P38646 679 aaKnown RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PPP1R2P41236 205 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PRCPP42785 496 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 CA7P43166 264 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PTPN9P43378 593 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 SYKP43405 635 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PAPOLAP51003 745 aaKnown RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 SH3BGRP55822 239 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 BPIFB4P59827 614 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 HSD11B2P80365 405 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 TLE4Q04727 773 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 COX10Q12887 443 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 AIMP2Q13155 320 aaKnown RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 GPS2Q13227 327 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 ATP1A4Q13733 1029 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 ZNF169Q14929 603 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 RAB39AQ14964 217 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 NCF4Q15080 339 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PLEKHS1Q5SXH7 462 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 FAM72AQ5TYM5 149 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 ZNF324BQ6AW86 544 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 FAM72DQ6L9T8 149 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 DOK6Q6PKX4 331 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 CCBE1Q6UXH8 406 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 WASH2PQ6VEQ5 465 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 TAOK1Q7L7X3 1001 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 TECPR1Q7Z6L1 1165 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 MRGPREQ86SM8 312 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 FAM72BQ86X60 149 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 TMEM126BQ8IUX1 230 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 CEP97Q8IW35 865 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 D2HGDHQ8N465 521 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 MNS1Q8NEH6 495 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 TEKT4Q8WW24 435 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 LRTOMTQ8WZ04 291 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 AP2M1Q96CW1 435 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 MTFMTQ96DP5 389 aaKnown RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 NEIL1Q96FI4 390 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 SLC35A4Q96G79 324 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 CFAP57Q96MR6 1250 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PSKH2Q96QS6 385 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 FOXC2Q99958 501 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 ENKD1Q9H0I2 346 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 CARD9Q9H257 536 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 ZMAT3Q9HA38 289 aaKnown RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 LANCL2Q9NS86 450 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 OLAHQ9NV23 265 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 PNPOQ9NVS9 261 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 ARGLU1Q9NWB6 273 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 TRMT1Q9NXH9 659 aaKnown RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 GIMAP2Q9UG22 337 aa5.25□□□□□ -1.57
PTCD3-207ENST00000467273 AJAP1Q9UKB5 411 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-207ENST00000467273 RCOR1Q9UKL0 485 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms