RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	CASTOR2	A6NHX0	329 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	ATP1B1	P05026	303 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	EPCAM	P16422	314 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	GATA2	P23769	480 aa	Predicted RBP	4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	CDH18	Q13634	790 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	TMEM132D	Q14C87	1099 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	NPTX1	Q15818	432 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	MTHFSD	Q2M296	383 aa	Known RBP	4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	TCP11X2	Q5H9J9	407 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	HECTD3	Q5T447	861 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	ZNF343	Q6P1L6	599 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	KIF6	Q6ZMV9	814 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	GPRIN3	Q6ZVF9	776 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	P2RY8	Q86VZ1	359 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	CATSPERD	Q86XM0	798 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	NOA1	Q8NC60	698 aa	Known RBP	4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	JAKMIP1	Q96N16	626 aa	Known RBP	4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	GBP5	Q96PP8	586 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	MAP3K3	Q99759	626 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	ZWILCH	Q9H900	591 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	MUTYH	Q9UIF7	546 aa		4.64	□□□□□ -1.67
CCNL1-209	ENST00000467081	EPM2A	B3EWF7	344 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	PI4K2B	G5E9Z4	385 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	CLDN4	O14493	209 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	SNX3	O60493	162 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	EEF1B2	P24534	225 aa	Known RBP	4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	RBMS1	P29558	406 aa	Known RBP	4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	CTNNA1	P35221	906 aa	Known RBP	4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	SOX3	P41225	446 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	TNNT3	P45378	269 aa	Predicted RBP	4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	ZNF41	P51814	821 aa	Predicted RBP	4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	TMEM50B	P56557	158 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	RBPJ	Q06330	500 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	ACSM1	Q08AH1	577 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	NONO	Q15233	471 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	PTPN14	Q15678	1187 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	CRY2	Q49AN0	593 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	TCTEX1D4	Q5JR98	221 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	ARMC4	Q5T2S8	1044 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	SPINK14	Q6IE38	97 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	THNSL1	Q8IYQ7	743 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	RYBP	Q8N488	228 aa	Predicted RBP	4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	RASGEF1A	Q8N9B8	481 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	AQP11	Q8NBQ7	271 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	ATP8B4	Q8TF62	1192 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	PROX1	Q92786	737 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	DNAJC4	Q9NNZ3	241 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	TXNDC16	Q9P2K2	825 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	CCL27	Q9Y4X3	112 aa		4.63	□□□□□ -1.67
CCNL1-209	ENST00000467081	AP5Z1	O43299	807 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	RPS6KA5	O75582	802 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	GSR	P00390	522 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	CCDC175	P0C221	793 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	OR52Z1	P0C646	297 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	FDPS	P14324	419 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	ALDH1B1	P30837	517 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	RGS19	P49795	217 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	RASGEF1B	Q0VAM2	473 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	TRIM29	Q14134	588 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	ZNF239	Q16600	458 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	NOTUM	Q6P988	496 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	IL17REL	Q6ZVW7	336 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	ANKRD13C	Q8N6S4	541 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	KIF18A	Q8NI77	898 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	ROBO4	Q8WZ75	1007 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	FER1L6-AS2	Q96M78	137 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	AGAP4	Q96P64	663 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	NAA11	Q9BSU3	229 aa	Predicted RBP	4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	DESI2	Q9BSY9	194 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	B3GAT2	Q9NPZ5	323 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	GSN-AS1	Q9NRJ2	163 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	ZHX2	Q9Y6X8	837 aa		4.62	□□□□□ -1.67
CCNL1-209	ENST00000467081	IGHV3OR16-10	A0A075B7F0	116 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	TRBV4-1	A0A0J9YWV2	114 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	FAM170A	A1A519	330 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	KRTAP9-6	A8MVA2	160 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	CCL24	O00175	119 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	ATP6AP2	O75787	350 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	KRT33A	O76009	404 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	QDPR	P09417	244 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	MUT	P22033	750 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	TLX1	P31314	330 aa	Predicted RBP	4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	RAB28	P51157	221 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	LIMK1	P53667	647 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	SGCG	Q13326	291 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	SCARB2	Q14108	478 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	CAVIN1	Q6NZI2	390 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	CTR9	Q6PD62	1173 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	FRRS1	Q6ZNA5	592 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	CHST3	Q7LGC8	479 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	SNX32	Q86XE0	403 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	LMNTD2	Q8IXW0	634 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	OR8H3	Q8N146	312 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	C11orf45	Q8TAV5	145 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	MIPOL1	Q8TD10	442 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	METTL21A	Q8WXB1	218 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	PIK3R3	Q92569	461 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	HDAC11	Q96DB2	347 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms