RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ACTR8Q9H981 624 aa14.56□□□□□ -0.08
NPHP4-205ENST00000466897 FAM60AQ9NP50 221 aa14.56□□□□□ -0.08
NPHP4-205ENST00000466897 SEMA4BQ9NPR2 832 aaPredicted RBP14.56□□□□□ -0.08
NPHP4-205ENST00000466897 GEMIN8Q9NWZ8 242 aaKnown RBP14.56□□□□□ -0.08
NPHP4-205ENST00000466897 TRPS1Q9UHF7 1281 aa14.56□□□□□ -0.08
NPHP4-205ENST00000466897 PLCL2Q9UPR0 1127 aa14.56□□□□□ -0.08
NPHP4-205ENST00000466897 KLHL20Q9Y2M5 609 aa14.56□□□□□ -0.08
NPHP4-205ENST00000466897 TMEM114B3SHH9 223 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 H0YIV9 168 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 KLF11O14901 512 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 HAT1O14929 419 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 SRPX2O60687 465 aaPredicted RBP14.55□□□□□ -0.08
NPHP4-205ENST00000466897 ESRRBO95718 433 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 CHN1P15882 459 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 CD22P20273 847 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 SERPINB1P30740 379 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 FOXK2Q01167 660 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 TARDBPQ13148 414 aaKnown RBP eCLIP14.55□□□□□ -0.08
NPHP4-205ENST00000466897 IL11RAQ14626 422 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 FBXO42Q6P3S6 717 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 RAB11FIP2Q7L804 512 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 ADCK2Q7Z695 626 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 LAS2Q8IYD9 372 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 TTLQ8NG68 377 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 WDR36Q8NI36 951 aaKnown RBP14.55□□□□□ -0.08
NPHP4-205ENST00000466897 TRPC4APQ8TEL6 797 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 AGAP11Q8TF27 550 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 ATP6V1E2Q96A05 226 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 OR2A5Q96R48 311 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 B3GNT4Q9C0J1 378 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 KLHL25Q9H0H3 589 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 FANCEQ9HB96 536 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 MLXIPLQ9NP71 852 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 FBXO8Q9NRD0 319 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 INTS9Q9NV88 658 aaKnown RBP14.55□□□□□ -0.08
NPHP4-205ENST00000466897 LOXL2Q9Y4K0 774 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 PCDHGA4Q9Y5G9 962 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 PCDHGA11Q9Y5H2 935 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 KNTC1P50748 2209 aa14.55□□□□□ -0.08
NPHP4-205ENST00000466897 H3BMH7 237 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 NRP2O60462 931 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 PRAMEF10O60809 474 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 ENO1P06733 434 aaKnown RBP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 FOLR1P15328 257 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 VARSP26640 1264 aaKnown RBP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 SCTRP47872 440 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 CLDN6P56747 220 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 RAB15P59190 212 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 MC2RQ01718 297 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 ZNF33BQ06732 778 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 TUBB3Q13509 450 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 SLBPQ14493 270 aaKnown RBP eCLIP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 CHI3L2Q15782 390 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 RBBP7Q16576 425 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 HIST2H2ACQ16777 129 aaPredicted RBP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 TCTE1Q5JU00 501 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 MANEAQ5SRI9 462 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 HIST2H2AA3Q6FI13 130 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 LETMD1Q6P1Q0 360 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 IGF2-ASQ6U949 168 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 TMIGD1Q6UXZ0 262 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 GPRIN3Q6ZVF9 776 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 RPS27LQ71UM5 84 aaKnown RBP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 MILR1Q7Z6M3 343 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 MCATQ8IVS2 390 aaKnown RBP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 KIRREL3Q8IZU9 778 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 MFSD9Q8NBP5 474 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 OR4F6Q8NGB9 312 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 MDM1Q8TC05 714 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 MGARPQ8TDB4 240 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 ZNF501Q96CX3 271 aaPredicted RBP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 REPS1Q96D71 796 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 FCRL4Q96PJ5 515 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 PAIP2Q9BPZ3 127 aaKnown RBP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 SLC29A3Q9BZD2 475 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 SPNS1Q9H2V7 528 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 RHBGQ9H310 441 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 EML4Q9HC35 981 aaKnown RBP14.54□□□□□ -0.08
NPHP4-205ENST00000466897 FGF21Q9NSA1 209 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 ADGRE2Q9UHX3 823 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 ZNF225Q9UK10 706 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 PCDHGA8Q9Y5G5 932 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 AP1M2Q9Y6Q5 423 aa14.54□□□□□ -0.08
NPHP4-205ENST00000466897 WDR91A4D1P6 747 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 EFCAB7A8K855 629 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 TXNDC9O14530 226 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 UBFD1O14562 309 aaKnown RBP14.53□□□□□ -0.08
NPHP4-205ENST00000466897 PLD2O14939 933 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 FGF5P12034 268 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 BCL6P41182 706 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 EMP3P54852 163 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 ERVPABLB-1P60509 514 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 SH3BP2P78314 561 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 KCNAB1Q14722 419 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 ARL13AQ5H913 290 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-205ENST00000466897 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 MED27Q6P2C8 311 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 ZCCHC23Q6ZST2 131 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 DGLUCYQ7Z3D6 616 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 SYVN1Q86TM6 617 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms