RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 SLC22A18Q96BI1 424 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 SEPHS2Q99611 448 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 TREX2Q9BQ50 279 aaPredicted RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 MRPL1Q9BYD6 325 aaKnown RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 OPA3Q9H6K4 179 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 ANKZF1Q9H8Y5 726 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 GDE1Q9NZC3 331 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 ZNF581Q9P0T4 197 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 PRDM4Q9UKN5 801 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 ELF5Q9UKW6 265 aaPredicted RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 ZNF256Q9Y2P7 627 aaPredicted RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 RALGAPA1Q6GYQ0 2036 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 RENP00797 406 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 PCP11498 1178 aaKnown RBP2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 EPCAMP16422 314 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 GCH1P30793 250 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 HOXD13P35453 343 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 LHX1P48742 406 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 NDST2P52849 883 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 DHODHQ02127 395 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 HSPB3Q12988 150 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 CUL3Q13618 768 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 CCBE1Q6UXH8 406 aaPredicted RBP2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 CHMP1BQ7LBR1 199 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 RNF130Q86XS8 419 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 ZC3H3Q8IXZ2 948 aaKnown RBP2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 NDUFAF2Q8N183 169 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 CSNK1G2-AS1Q8NCQ2 148 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 MRAPQ8TCY5 172 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 CHURC1Q8WUH1 139 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 MOB3AQ96BX8 217 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 NSUN4Q96CB9 384 aaKnown RBP2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 NXNL1Q96CM4 212 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 PANK2Q9BZ23 570 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 OCR1Q9BZK8 76 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 EGLN3Q9H6Z9 239 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 JPT2Q9H910 190 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 ZNF215Q9UL58 517 aaPredicted RBP2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 VSIG4Q9Y279 399 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 SELENOKQ9Y6D0 94 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 IGSF1Q8N6C5 1336 aa2.16□□□□□ -2.06
GTF3C3-209ENST00000466862 GLTPD2A6NH11 291 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 GLOD5A6NK44 160 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 TRIM77I1YAP6 450 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 CSN3P07498 182 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 LINGO3P0C6S8 592 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 PRKAR1AP10644 381 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 CYP11B2P19099 503 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 CD22P20273 847 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 STAT2P52630 851 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 EPS8Q12929 822 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 SGCGQ13326 291 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 UPP1Q16831 310 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 TMEM266Q2M3C6 531 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 OR4C11Q6IEV9 310 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 SLC24A5Q71RS6 500 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 CARM1Q86X55 608 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 HSCBQ8IWL3 235 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 GPC2Q8N158 579 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 C17orf53Q8N3J3 647 aaPredicted RBP2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 CD177Q8N6Q3 437 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 PRPF31Q8WWY3 499 aaKnown RBP2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 ATL1Q8WXF7 558 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 NSMAFQ92636 917 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 TMCO6Q96DC7 493 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 ZNF830Q96NB3 372 aaPredicted RBP2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 KLHL5Q96PQ7 755 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 TEX12Q9BXU0 123 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 GHITMQ9H3K2 345 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 TBC1D29Q9UFV1 150 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 RNF150Q9ULK6 438 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 PLCL2Q9UPR0 1127 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 CHKBQ9Y259 395 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 RPS6KL1Q9Y6S9 549 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 UMODL1Q5DID0 1318 aa2.15□□□□□ -2.07
GTF3C3-209ENST00000466862 FER1L5A0AVI2 2057 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 IGHV3-16A0A0C4DH30 117 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 A6NCN8 305 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 SLC1A7O00341 560 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 TIMM44O43615 452 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 CSH1P0DML2 217 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 CSH2P0DML3 217 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 CD59P13987 128 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 AOC1P19801 751 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 KLK2P20151 261 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 LMO2P25791 158 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 LMAN1P49257 510 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 GSK3BP49841 420 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 EIF5P55010 431 aaKnown RBP2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 NDUFV3P56181 108 aaKnown RBP2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 LYZP61626 148 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 VEZF1Q14119 521 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 KIAA0141Q14154 515 aaPredicted RBP2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 CAPRIN1Q14444 709 aaKnown RBP2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 KCTD2Q14681 263 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 SIX1Q15475 284 aaPredicted RBP2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 SNAPC1Q16533 368 aa2.14□□□□□ -2.07
GTF3C3-209ENST00000466862 NTRK2Q16620 822 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms