RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 NKAPQ8N5F7 415 aaKnown RBP12.35□□□□□ -0.43
XRN1-203ENST00000463916 CDKL2Q92772 493 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 FBXL8Q96CD0 374 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 GPR22Q99680 433 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 PCBD2Q9H0N5 130 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 WDR54Q9H977 334 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 ZNF304Q9HCX3 659 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 MLXIPLQ9NP71 852 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 COL12A1Q99715 3063 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 ENO2P09104 434 aaPredicted RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 GSTA2P09210 222 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 GP5P40197 560 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 BCL6P41182 706 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 EMP3P54852 163 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 POU4F1Q01851 419 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 MEF2AQ02078 507 aaPredicted RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 USP10Q14694 798 aaKnown RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 C18orf21Q32NC0 220 aaPredicted RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 VWA2Q5GFL6 755 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 CAPN13Q6MZZ7 669 aaPredicted RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 LAPTM4BQ86VI4 370 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 PPM1NQ8N819 430 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 FDCSPQ8NFU4 85 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 ANKRD7Q92527 254 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 RERGQ96A58 199 aaPredicted RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 COL26A1Q96A83 441 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 TRIM54Q9BYV2 358 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 TRIM4Q9C037 500 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 P4HTMQ9NXG6 502 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 NOVA2Q9UNW9 492 aaKnown RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 KCNE1BA0A087WTH5 132 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 CEACAM4O75871 244 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 CD63P08962 238 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 PIM1P11309 404 aaPredicted RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 CCND1P24385 295 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 HRH2P25021 359 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 RAPSNQ13702 412 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 CATSPEREQ5SY80 951 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 PRMT9Q6P2P2 845 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 ASB18Q6ZVZ8 466 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 MED25Q71SY5 747 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 RAB43Q86YS6 212 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 PRSS58Q8IYP2 241 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 AMER3Q8N944 861 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 TMEM102Q8N9M5 508 aaPredicted RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 ZNF740Q8NDX6 193 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 STT3BQ8TCJ2 826 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 NEIL2Q969S2 332 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 SLC25A23Q9BV35 468 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 SPNS1Q9H2V7 528 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 POPDC3Q9HBV1 291 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
XRN1-203ENST00000463916 HEMK1Q9Y5R4 338 aaPredicted RBP12.34□□□□□ -0.43
XRN1-203ENST00000463916 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
XRN1-203ENST00000463916 CTAGE15A4D2H0 777 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
XRN1-203ENST00000463916 CCDC166P0CW27 439 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 KLC1Q07866 573 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 ZKSCAN8Q15776 578 aaPredicted RBP12.33□□□□□ -0.44
XRN1-203ENST00000463916 SYT16Q17RD7 645 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 DCAF10Q5QP82 559 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 PRSS41Q7RTY9 318 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 CTAGE6Q86UF2 777 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 ABHD11Q8NFV4 315 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 OR4K1Q8NGD4 311 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 TM4SF19Q96DZ7 209 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 TSNARE1Q96NA8 513 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 NUDT9Q9BW91 350 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 DERL2Q9GZP9 239 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 SLC22A14Q9Y267 594 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 OARD1Q9Y530 152 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 HS3ST3B1Q9Y662 390 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 UBR5O95071 2799 aaPredicted RBP12.33□□□□□ -0.44
XRN1-203ENST00000463916 J3QKU1 62 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 SOCS6O14544 535 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 ALOX12BO75342 701 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 ZGLP1P0C6A0 271 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 MMP11P24347 488 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 ECHS1P30084 290 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 SLC26A3P40879 764 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 GDF5P43026 501 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 SLC12A2P55011 1212 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 RPS15AP62244 130 aaKnown RBP12.33□□□□□ -0.44
XRN1-203ENST00000463916 GRTP1Q5TC63 336 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 GARNL3Q5VVW2 1013 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 KIRREL2Q6UWL6 708 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 CMC1Q7Z7K0 106 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 KCT2Q8NC54 265 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 ATL1Q8WXF7 558 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 MOCOSQ96EN8 888 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 MMABQ96EY8 250 aaPredicted RBP12.33□□□□□ -0.44
XRN1-203ENST00000463916 UBXN10Q96LJ8 280 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 HAUS8Q9BT25 410 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 DRC3Q9H069 523 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 EPN3Q9H201 632 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 CTNNAL1Q9UBT7 734 aa12.33□□□□□ -0.44
XRN1-203ENST00000463916 ZNF282Q9UDV7 671 aaPredicted RBP12.33□□□□□ -0.44
XRN1-203ENST00000463916 PCDHGA9Q9Y5G4 932 aaKnown RBP12.33□□□□□ -0.44
XRN1-203ENST00000463916 IGLV3-12A0A075B6K2 115 aa12.32□□□□□ -0.44
XRN1-203ENST00000463916 HMX2A2RU54 273 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms