RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 H0YIG0 161 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 NRP2O60462 931 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 SEC31AO94979 1220 aaKnown RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 HPP00738 406 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 AHSGP02765 367 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 ANXA5P08758 320 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 ENO2P09104 434 aaPredicted RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 HIST1H2AGP0C0S8 130 aaPredicted RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 ACPPP15309 386 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 HIST1H2ADP20671 130 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 ITGA3P26006 1051 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 GABRB3P28472 473 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 SLC26A3P40879 764 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 IL2P60568 153 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 TBPL1P62380 186 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 AP2B1P63010 937 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 YBX1P67809 324 aaKnown RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 TIAL1Q01085 375 aaKnown RBP eCLIP11.32□□□□□ -0.6
RTCB-202ENST00000463455 KLC1Q07866 573 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 INPP5JQ15735 1006 aaPredicted RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 COLEC12Q5KU26 742 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 TEDDM1Q5T9Z0 273 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 AGAP7PQ5VUJ5 663 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 FAM45BPQ6NSW5 357 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 LCTLQ6UWM7 567 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 Q6ZS92 163 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 C17orf64Q86WR6 236 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 BBOF1Q8ND07 529 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 PPFIBP2Q8ND30 876 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 OR11G2Q8NGC1 345 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 FAM45AQ8TCE6 357 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 EEF1AKMT1Q8WVE0 214 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 ATL1Q8WXF7 558 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 ANKRD7Q92527 254 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 SNF8Q96H20 258 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 PDLIM5Q96HC4 596 aaKnown RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 HIST1H2AHQ96KK5 128 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 AGAP4Q96P64 663 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 HIST1H2AJQ99878 128 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 HAUS8Q9BT25 410 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 H2AFJQ9BTM1 129 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 SARGQ9BW04 601 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 SGPP1Q9BX95 441 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 TRIM54Q9BYV2 358 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 LHPPQ9H008 270 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 SOX17Q9H6I2 414 aaPredicted RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 NSMCE4AQ9NXX6 385 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 C3orf18Q9UK00 162 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 PDE10AQ9Y233 779 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 MAU2Q9Y6X3 613 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 USP9YO00507 2555 aaPredicted RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 SPTBN1Q01082 2364 aaKnown RBP11.32□□□□□ -0.6
RTCB-202ENST00000463455 ESPL1Q14674 2120 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 DOCK10Q96BY6 2186 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 PABPN1LA6NDY0 278 aaKnown RBP11.31□□□□□ -0.6
RTCB-202ENST00000463455 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 E7ESA3 106 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 MAP2K7O14733 419 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 HAT1O14929 419 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 MED26O95402 600 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 NSA2O95478 260 aaKnown RBP11.31□□□□□ -0.6
RTCB-202ENST00000463455 TSPAN12O95859 305 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
RTCB-202ENST00000463455 GRK3P35626 688 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 ELK3P41970 407 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 AVPR1BP47901 424 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 CDKN2DP55273 166 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 ATG9BQ674R7 924 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 DUPD1Q68J44 220 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 CAPN13Q6MZZ7 669 aaPredicted RBP11.31□□□□□ -0.6
RTCB-202ENST00000463455 AGTRAPQ6RW13 159 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 PAQR3Q6TCH7 311 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 ADCK2Q7Z695 626 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 IGDCC3Q8IVU1 814 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 CAMKVQ8NCB2 501 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 CAPZA3Q96KX2 299 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 NDNQ99608 321 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 WDR77Q9BQA1 342 aaPredicted RBP11.31□□□□□ -0.6
RTCB-202ENST00000463455 EPS8L2Q9H6S3 715 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 PLAC1Q9HBJ0 212 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 PPANQ9NQ55 473 aaKnown RBP11.31□□□□□ -0.6
RTCB-202ENST00000463455 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
RTCB-202ENST00000463455 ZFATQ9P243 1243 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 TRPC4Q9UBN4 977 aa11.31□□□□□ -0.6
RTCB-202ENST00000463455 NOVA2Q9UNW9 492 aaKnown RBP11.31□□□□□ -0.6
RTCB-202ENST00000463455 RELNP78509 3460 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 PRRC2CQ9Y520 2896 aaKnown RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 MAST4O15021 2626 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 IDSB3KWA1 339 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 H7BY64 318 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 FOXS1O43638 330 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 BANF1O75531 89 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 F7P08709 466 aaPredicted RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 CXCR2P25025 360 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 ITGA8P53708 1063 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 FOXL2P58012 376 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 MGAT5Q09328 741 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 RAPSNQ13702 412 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms