RNA–Protein interactions for RNA: ENST00000463421.1

NFX1-204, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 3

Gene NFX1, Length 987 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-204	ENST00000463421	ZSCAN5DP	P0CG00	497 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	CHRM3	P20309	590 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	HSD17B2	P37059	387 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	NPY2R	P49146	381 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	SMS	P52788	366 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	EFNA3	P52797	238 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	ADORA2A-AS1	P86434	159 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	PRDX1	Q06830	199 aa	Known RBP	13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	FAM53B	Q14153	422 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	NDUFA9	Q16795	377 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	TYSND1	Q2T9J0	566 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	KLHL38	Q2WGJ6	581 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	ACSBG2	Q5FVE4	666 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	MFSD4B	Q5TF39	518 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	TXLNB	Q8N3L3	684 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	ARHGEF39	Q8N4T4	335 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	MAGED4	Q96JG8	741 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	TRIM8	Q9BZR9	551 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	ABCF3	Q9NUQ8	709 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	BFAR	Q9NZS9	450 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	ADGRG4	Q8IZF6	3080 aa		13.99	□□□□□ -0.17
NFX1-204	ENST00000463421	IGHV3-20	A0A0C4DH32	117 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	GOLGA8K	D6RF30	607 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421		E5RI56	91 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	GOLGA8T	H3BQL2	631 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	SMAP	O00193	183 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	AP3B1	O00203	1094 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	HAT1	O14929	419 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	VAPB	O95292	243 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	CYC1	P08574	325 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	AGA	P20933	346 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	RPL22	P35268	128 aa	Known RBP	13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	ABAT	P80404	500 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	BASP1	P80723	227 aa	Known RBP	13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	RELA	Q04206	551 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	GTF3C1	Q12789	2109 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	C3AR1	Q16581	482 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	BTBD16	Q32M84	506 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	MINDY4	Q4G0A6	757 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	PLAG1	Q6DJT9	500 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	LANCL3	Q6ZV70	420 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	BEST3	Q8N1M1	668 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	PPFIBP2	Q8ND30	876 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	OR9A4	Q8NGU2	314 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	MFSD3	Q96ES6	412 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	ZNF354B	Q96LW1	612 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	TCF12	Q99081	682 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	PKP4	Q99569	1192 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	EBNA1BP2	Q99848	306 aa	Known RBP	13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	VN1R1	Q9GZP7	353 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	SYBU	Q9NX95	663 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	TINAG	Q9UJW2	476 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	ITGB1BP2	Q9UKP3	347 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	CRYL1	Q9Y2S2	319 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	PCDHGB6	Q9Y5F9	930 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	CAPN6	Q9Y6Q1	641 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	TACC2	O95359	2948 aa		13.98	□□□□□ -0.17
NFX1-204	ENST00000463421	C2CD3	Q4AC94	2353 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	FAM227A	F5H4B4	570 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421		H0YIG0	161 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	TTI1	O43156	1089 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	MLYCD	O95822	493 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	SLC16A8	O95907	504 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	SYF2	O95926	243 aa	Known RBP	13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	MGAT1	P26572	445 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	ARNT	P27540	789 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	ZNF75D	P51815	510 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	ADAR	P55265	1226 aa	Known RBP	13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	KCNJ11	Q14654	390 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	ACER2	Q5QJU3	275 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	THEMIS2	Q5TEJ8	643 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	FCRLB	Q6BAA4	426 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	CES3	Q6UWW8	571 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	PLD3	Q8IV08	490 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	THAP3	Q8WTV1	239 aa	Predicted RBP	13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	ZNF480	Q8WV37	535 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	GPR137	Q96N19	417 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	CYTH2	Q99418	400 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	BAG1	Q99933	345 aa	Predicted RBP	13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	KIFC1	Q9BW19	673 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	KCNK13	Q9HB14	408 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	GALP	Q9UBC7	116 aa		13.97	□□□□□ -0.17
NFX1-204	ENST00000463421	DRG1	Q9Y295	367 aa	Known RBP	13.97	□□□□□ -0.17
NFX1-204	ENST00000463421		E7ENX8	843 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	WISP2	O76076	250 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	NSA2	O95478	260 aa	Known RBP	13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	STATH	P02808	62 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	OGN	P20774	298 aa	Known RBP	13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	SSTR2	P30874	369 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	ALDH6A1	Q02252	535 aa	Known RBP	13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	TAP2	Q03519	686 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	TUBA3C	Q13748	450 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	TTLL9	Q3SXZ7	439 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	KRTCAP3	Q53RY4	240 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	TUBA3E	Q6PEY2	450 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	C4orf22	Q6V702	233 aa		13.96	□□□□□ -0.17
NFX1-204	ENST00000463421	CRLF3	Q8IUI8	442 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms