RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 KIFC1Q9BW19 673 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 DRC3Q9H069 523 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 CHST11Q9NPF2 352 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 FAM114A2Q9NRY5 505 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 APCP25054 2843 aa18.77■□□□□ 0.59
VARS-221ENST00000463184 ARHGEF33A8MVX0 844 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 KIF2AO00139 706 aaPredicted RBP18.76■□□□□ 0.59
VARS-221ENST00000463184 CCL21O00585 134 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 FOXS1O43638 330 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 NIPSNAP2O75323 286 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 PSIP1O75475 530 aaKnown RBP18.76■□□□□ 0.59
VARS-221ENST00000463184 CCNDBP1O95273 360 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 VAPBO95292 243 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 F10P00742 488 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 ESR1P03372 595 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 ZSCAN5DPP0CG00 497 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 EZRP15311 586 aaKnown RBP18.76■□□□□ 0.59
VARS-221ENST00000463184 POU3F2P20265 443 aaPredicted RBP18.76■□□□□ 0.59
VARS-221ENST00000463184 CHRM3P20309 590 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 ARNTP27540 789 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 COILP38432 576 aaPredicted RBP18.76■□□□□ 0.59
VARS-221ENST00000463184 RBPJQ06330 500 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 FAM53BQ14153 422 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 TYSND1Q2T9J0 566 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 ICE2Q659A1 982 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 ZNF425Q6IV72 752 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 MRGPRGQ86SM5 289 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 ARHGEF39Q8N4T4 335 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 ZNF808Q8N4W9 903 aaPredicted RBP18.76■□□□□ 0.59
VARS-221ENST00000463184 MFSD3Q96ES6 412 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 CCDC120Q96HB5 630 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 IMMP1LQ96LU5 166 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 SYNPO2LQ9H987 977 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 STMN3Q9NZ72 180 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 SEC14L3Q9UDX4 400 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 TAC3Q9UHF0 121 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 TEKT2Q9UIF3 430 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 TSR3Q9UJK0 312 aaKnown RBP18.76■□□□□ 0.59
VARS-221ENST00000463184 MKL2Q9ULH7 1088 aa18.76■□□□□ 0.59
VARS-221ENST00000463184 OR5H15A6NDH6 313 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 PRAMEF2O60811 474 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 CATP04040 527 aaKnown RBP18.75■□□□□ 0.59
VARS-221ENST00000463184 MST1P26927 711 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 GRNP28799 593 aaKnown RBP18.75■□□□□ 0.59
VARS-221ENST00000463184 PTGER4P35408 488 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 CA7P43166 264 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 FNTAP49354 379 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 PNLIPRP1P54315 467 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 TSTA3Q13630 321 aaPredicted RBP18.75■□□□□ 0.59
VARS-221ENST00000463184 NDUFA9Q16795 377 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 LONRF1Q17RB8 773 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 KLHL38Q2WGJ6 581 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 TTC27Q6P3X3 843 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 CCDC137Q6PK04 289 aaKnown RBP18.75■□□□□ 0.59
VARS-221ENST00000463184 RPTNQ6XPR3 784 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 BNC2Q6ZN30 1099 aaPredicted RBP18.75■□□□□ 0.59
VARS-221ENST00000463184 METTL21AQ8WXB1 218 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 FAM136AQ96C01 138 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 PKP4Q99569 1192 aa18.75■□□□□ 0.59
VARS-221ENST00000463184 TEP1Q99973 2627 aaKnown RBP18.75■□□□□ 0.59
VARS-221ENST00000463184 HEATR5BQ9P2D3 2071 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 A0A0A6YYC8 382 aaPredicted RBP18.74■□□□□ 0.59
VARS-221ENST00000463184 I3L1I5 382 aaPredicted RBP18.74■□□□□ 0.59
VARS-221ENST00000463184 CYC1P08574 325 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 C8orf89P0DMQ9 161 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 HTR1EP28566 365 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 ABATP80404 500 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 BASP1P80723 227 aaKnown RBP18.74■□□□□ 0.59
VARS-221ENST00000463184 SYT16Q17RD7 645 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 ZNF630Q2M218 657 aaPredicted RBP18.74■□□□□ 0.59
VARS-221ENST00000463184 ZXDCQ2QGD7 858 aaPredicted RBP18.74■□□□□ 0.59
VARS-221ENST00000463184 ACSBG2Q5FVE4 666 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 ZC3H7AQ8IWR0 971 aaKnown RBP18.74■□□□□ 0.59
VARS-221ENST00000463184 PCYOX1Q9UHG3 505 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 CRYL1Q9Y2S2 319 aa18.74■□□□□ 0.59
VARS-221ENST00000463184 CPAMD8Q8IZJ3 1885 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 GOLGA8KD6RF30 607 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 E5RI56 91 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 GOLGA8TH3BQL2 631 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 OGNP20774 298 aaKnown RBP18.73■□□□□ 0.59
VARS-221ENST00000463184 MGAT1P26572 445 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 AVPR1BP47901 424 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 CASP6P55212 293 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 ZNF33BQ06732 778 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 XKRXQ6PP77 449 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 CES3Q6UWW8 571 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 NEK10Q6ZWH5 1172 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 GDF7Q7Z4P5 450 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 GRK7Q8WTQ7 553 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 EBNA1BP2Q99848 306 aaKnown RBP18.73■□□□□ 0.59
VARS-221ENST00000463184 SYBUQ9NX95 663 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 GALPQ9UBC7 116 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 SOX13Q9UN79 622 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 VPS9D1Q9Y2B5 631 aa18.73■□□□□ 0.59
VARS-221ENST00000463184 E7ENX8 843 aa18.72■□□□□ 0.59
VARS-221ENST00000463184 H0YIG0 161 aa18.72■□□□□ 0.59
VARS-221ENST00000463184 CCDC188H7C350 402 aa18.72■□□□□ 0.59
VARS-221ENST00000463184 SLC16A8O95907 504 aa18.72■□□□□ 0.59
VARS-221ENST00000463184 MAT1AQ00266 395 aaKnown RBP18.72■□□□□ 0.59
VARS-221ENST00000463184 CDK16Q00536 496 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms