RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 LKAAEAR1Q8TD35 194 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 CDKN2AIPNLQ96HQ2 116 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 ZNF354BQ96LW1 612 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 OLFM1Q99784 485 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 APOL2Q9BQE5 337 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 MAK16Q9BXY0 300 aaKnown RBP7.27□□□□□ -1.25
SMC3-202ENST00000462899 VN1R1Q9GZP7 353 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 TRIM45Q9H8W5 580 aaPredicted RBP7.27□□□□□ -1.25
SMC3-202ENST00000462899 NEUROD4Q9HD90 331 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 KLHL1Q9NR64 748 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 ANKRD10Q9NXR5 420 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 TRPC4Q9UBN4 977 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 ZC3H7BQ9UGR2 993 aaKnown RBP7.27□□□□□ -1.25
SMC3-202ENST00000462899 CIDEBQ9UHD4 219 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 RSPH14Q9UHP6 348 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 TRHDEQ9UKU6 1024 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 RUVBL1Q9Y265 456 aaKnown RBP7.27□□□□□ -1.25
SMC3-202ENST00000462899 LUC7L2Q9Y383 392 aaKnown RBP7.27□□□□□ -1.25
SMC3-202ENST00000462899 FAM169AQ9Y6X4 670 aa7.27□□□□□ -1.25
SMC3-202ENST00000462899 ARID1AO14497 2285 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 IGHV3-20A0A0C4DH32 117 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 IGKV1-8A0A0C4DH67 115 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 A0A0U1RQJ8 604 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 FAM237BA0A1B0GVD1 139 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 KRT87PA6NCN2 255 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 FAM90A27PA6NNH2 459 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 HACD1B0YJ81 288 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 H0YGG7 62 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 NME2P1O60361 137 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 CST8O60676 142 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 ANXA9O76027 345 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 SEC24DO94855 1032 aaPredicted RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 HEXAP06865 529 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 TPOP07202 933 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 HEXBP07686 556 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 SP1P08047 785 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 H2AFZP0C0S5 128 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 C8orf89P0DMQ9 161 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 ERGP11308 486 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 ZNF24P17028 368 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 NME2P22392 152 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 PSMB4P28070 264 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 CCR7P32248 378 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 ST13P50502 369 aaKnown RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 ARF3P61204 181 aaPredicted RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 FASTKQ14296 549 aaKnown RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 MESDQ14696 234 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 NR1I3Q14994 352 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 SF1Q15637 639 aaKnown RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 STX1AQ16623 288 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 MEP1AQ16819 746 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 SYT16Q17RD7 645 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 HKDC1Q2TB90 917 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 GARNL3Q5VVW2 1013 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 KCTD11Q693B1 232 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 FIGNL1Q6PIW4 674 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 UNC5DQ6UXZ4 953 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 CEP128Q6ZU80 1094 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 H2AFVQ71UI9 128 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 CXXC5Q7LFL8 322 aaKnown RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 TMTC1Q8IUR5 882 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 LGI4Q8N135 537 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 WFDC11Q8NEX6 87 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 SEC16BQ96JE7 1060 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 ZFYVE21Q9BQ24 234 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 MMP25Q9NPA2 562 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 ANO10Q9NW15 660 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 DNAJB12Q9NXW2 375 aaKnown RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 SMARCAL1Q9NZC9 954 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 FEZ2Q9UHY8 353 aaPredicted RBP7.26□□□□□ -1.25
SMC3-202ENST00000462899 GNPTGQ9UJJ9 305 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 NCKAP5O14513 1909 aa7.26□□□□□ -1.25
SMC3-202ENST00000462899 CHD3Q12873 2000 aaKnown RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 SONP18583 2426 aaKnown RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 hCG_1818297A0A087WSY0 165 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 MROH6A6NGR9 719 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 OR51F1A6NGY5 319 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 GABRR3A8MPY1 467 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 P2RX6O15547 441 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 PRPF4O43172 522 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMC3-202ENST00000462899 OR1I1O60431 355 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 ZWINTO95229 277 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 UQCRHP07919 91 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 TMEM253P0C7T8 217 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 RBL1P28749 1068 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 HOXC12P31275 282 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 PTGS2P35354 604 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 NR0B1P51843 470 aaKnown RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 TFDP2Q14188 446 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 BTBD16Q32M84 506 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 CCSMST1Q4G0I0 132 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 SYTL3Q4VX76 610 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 CMPK2Q5EBM0 449 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 TMEM198Q66K66 360 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 TMEM211Q6ICI0 200 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 ZNF425Q6IV72 752 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 SLC25A25Q6KCM7 469 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 PAMR1Q6UXH9 720 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 Q71RC1 249 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms