RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 THSD1Q9NS62 852 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 COPG2Q9UBF2 871 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 MID2Q9UJV3 735 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 SERTAD3Q9UJW9 196 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 PCTPQ9UKL6 214 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 HEATR5BQ9P2D3 2071 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 TRBC2A0A5B9 178 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 H0YGG7 62 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 LCMT2O60294 686 aaKnown RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 KATNA1O75449 491 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 SCRG1O75711 98 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 OR2B3O76000 313 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 IMPDH1P20839 514 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 BCL6P41182 706 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 PIK3CGP48736 1102 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 PRKAA2P54646 552 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 VSX2P58304 361 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ERVPABLB-1P60509 514 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ARF3P61204 181 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 MAGOHP61326 146 aaKnown RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 RPS15AP62244 130 aaKnown RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 HERVK_113P63132 956 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 REEP5Q00765 189 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 IRF8Q02556 426 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 PCDH1Q08174 1060 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 CHIT1Q13231 466 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 DOC2AQ14183 400 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 E2F2Q14209 437 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 SLBPQ14493 270 aaKnown RBP eCLIP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 PCLAFQ15004 111 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 TBC1D25Q3MII6 688 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 UNC50Q53HI1 259 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 TCTE1Q5JU00 501 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 AGBL2Q5U5Z8 902 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 PRAMEF17Q5VTA0 474 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 RPS27LQ71UM5 84 aaKnown RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 TMEM126BQ8IUX1 230 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 GPR135Q8IZ08 494 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 MDM1Q8TC05 714 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ZNF483Q8TF39 744 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ARL8AQ96BM9 186 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 TLCD1Q96CP7 247 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 CCDC126Q96EE4 140 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 THAP11Q96EK4 314 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 RNF31Q96EP0 1072 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 WDR34Q96EX3 536 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 PTCD3Q96EY7 689 aaKnown RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ZNF578Q96N58 590 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 EFCAB11Q9BUY7 163 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 SARGQ9BW04 601 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ERVK-6Q9BXR3 956 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 IPPKQ9H8X2 491 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ZBTB26Q9HCK0 441 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ACSS2Q9NR19 701 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ENAMQ9NRM1 1142 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 OXSMQ9NWU1 459 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 IRAK4Q9NWZ3 460 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 GEMIN8Q9NWZ8 242 aaKnown RBP11.28□□□□□ -0.6
CPNE1-221ENST00000462352 ASPMQ8IZT6 3477 aa11.28□□□□□ -0.6
CPNE1-221ENST00000462352 KCNE1BA0A087WTH5 132 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 OR7A17O14581 309 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 ZSCAN9O15535 394 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 PRPF4O43172 522 aaKnown RBP eCLIP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 OR1F1O43749 312 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 H2AFYO75367 372 aaKnown RBP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 WFS1O76024 890 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 KIAA0754O94854 1291 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 SUPT7LO94864 414 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 EIF2S1P05198 315 aaKnown RBP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 C1QTNF9P0C862 333 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF28P17035 718 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 CD22P20273 847 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 CXCR2P25025 360 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 CASP2P42575 452 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 ETV4P43268 484 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 SCTRP47872 440 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 CDH13P55290 713 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 FOXK2Q01167 660 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 TBCCQ15814 346 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 WASHC2DQ5SRD0 308 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 TLDC1Q6P9B6 456 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 VN1R4Q7Z5H5 301 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 C10orf107Q8IVU9 208 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 TBC1D19Q8N5T2 526 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF655Q8N720 491 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 ANKRD53Q8N9V6 530 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 MFSD9Q8NBP5 474 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 PPP4R1Q8TF05 950 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 RERGQ96A58 199 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 MOCOSQ96EN8 888 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 SH3GL2Q99962 352 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 ULBP3Q9BZM4 244 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 SPRY4Q9C004 299 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 CCDC86Q9H6F5 360 aaKnown RBP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 NOL11Q9H8H0 719 aaKnown RBP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 KCNK9Q9NPC2 374 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms