RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 VWA7Q9Y334 891 aa5.55□□□□□ -1.52
VPS36-202ENST00000462289 EMC9Q9Y3B6 208 aa5.55□□□□□ -1.52
VPS36-202ENST00000462289 PCDHGA3Q9Y5H0 932 aa5.55□□□□□ -1.52
VPS36-202ENST00000462289 ZFYVE26Q68DK2 2539 aa5.55□□□□□ -1.52
VPS36-202ENST00000462289 NUP210LQ5VU65 1888 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 CCDC88CQ9P219 2028 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 CPED1A4D0V7 1026 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 PDZK1P1A8MUH7 402 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 ARHGEF33A8MVX0 844 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 B4E171 279 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 TMX2-CTNND1H3BSU7 103 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 MATN2O00339 956 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 SLC16A5O15375 505 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 DUX1O43812 170 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 NPHS1O60500 1241 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 UBXN7O94888 489 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 SLU7O95391 586 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 VIPP01282 170 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 RPLP0P05388 317 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 F7P08709 466 aaPredicted RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 FMO4P31512 558 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 DEKP35659 375 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 TSPAN7P41732 249 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 HALP42357 657 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 LSSP48449 732 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 RAB28P51157 221 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 TERF1P54274 439 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 OR1D5P58170 312 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 CDKL1Q00532 357 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 SP140Q13342 867 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 SLMAPQ14BN4 828 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 UAP1Q16222 522 aaPredicted RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 CDKL4Q5MAI5 379 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 HECTD2Q5U5R9 776 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 PTRHD1Q6GMV3 140 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 FAM45BPQ6NSW5 357 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 DUS1LQ6P1R4 473 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 SH2D5Q6ZV89 423 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 OTOAQ7RTW8 1153 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 CCDC91Q7Z6B0 441 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 ZNF761Q86XN6 746 aaPredicted RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 KMT5CQ86Y97 462 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 TDRPQ86YL5 185 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 CEP97Q8IW35 865 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 DCUN1D3Q8IWE4 304 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 MREGQ8N565 214 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 ZBTB2Q8N680 514 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 OR52E1Q8NGJ3 308 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 OR5AR1Q8NGP9 310 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 OR2L8Q8NGY9 312 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 FAM45AQ8TCE6 357 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 RSC1A1Q92681 617 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 INPP5DQ92835 1189 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 CFAP36Q96G28 342 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 C12orf66Q96MD2 445 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 ZNF285Q96NJ3 590 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 GPR78Q96P69 363 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 DEPDC7Q96QD5 511 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 GFM1Q96RP9 751 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 GPR21Q99679 349 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 TBC1D10AQ9BXI6 508 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 OSGEPL1Q9H4B0 414 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 ZNF768Q9H5H4 540 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 RDH14Q9HBH5 336 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 TAS2R13Q9NYV9 303 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 TMEM9Q9P0T7 183 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 SPATA7Q9P0W8 599 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 MTRF1LQ9UGC7 380 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 NFU1Q9UMS0 254 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 PSMD13Q9UNM6 376 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 PCDHGA7Q9Y5G6 932 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 NFS1Q9Y697 457 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 COLEC10Q9Y6Z7 277 aa5.54□□□□□ -1.52
VPS36-202ENST00000462289 TLN1Q9Y490 2541 aaKnown RBP5.54□□□□□ -1.52
VPS36-202ENST00000462289 IGSF10Q6WRI0 2623 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ATMQ13315 3056 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 FAM208BQ5VWN6 2430 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CCDC187A0A096LP49 1063 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 TLCD2A6NGC4 264 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 RHPN2P1A8MT19 583 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 IFRD1O00458 451 aaPredicted RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 BTN3A3O00478 584 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 BTN3A1O00481 513 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 RASGRF2O14827 1237 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 NVLO15381 856 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 ZW10O43264 779 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 RIPK2O43353 540 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 SNX2O60749 519 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CSO75390 466 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 VPS26AO75436 327 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 PIAS1O75925 651 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ALDOAP04075 364 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 NTRK1P04629 796 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 PROS1P07225 676 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ITGA2BP08514 1039 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 NUDT17P0C025 328 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 SLC35E2BP0CK96 405 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 NELFEP18615 380 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 SHMT2P34897 504 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 KPNA2P52292 529 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms