RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 NAE1Q13564 534 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 ZNF460Q14592 562 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 MYBPC3Q14896 1274 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 IGFBP7Q16270 282 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 SLC6A19Q695T7 634 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 CAPN13Q6MZZ7 669 aaPredicted RBP9.68□□□□□ -0.86
SF3A3-204ENST00000462258 LCTLQ6UWM7 567 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 MAATS1Q7Z4T9 603 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 VN1R4Q7Z5H5 301 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 ZC3HC1Q86WB0 502 aaKnown RBP9.68□□□□□ -0.86
SF3A3-204ENST00000462258 PRSS58Q8IYP2 241 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 ARHGEF39Q8N4T4 335 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 VPS50Q96JG6 964 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 PRAP1Q96NZ9 151 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 ERP44Q9BS26 406 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 SGPP1Q9BX95 441 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 DRC3Q9H069 523 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 SAYSD1Q9NPB0 183 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 TMEM184CQ9NVA4 438 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 C14orf105Q9NVL8 296 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 NSMCE4AQ9NXX6 385 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 LUZP4Q9P127 313 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 WHRNQ9P202 907 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 TRPC4Q9UBN4 977 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 VWA7Q9Y334 891 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 SHANK1Q9Y566 2161 aa9.68□□□□□ -0.86
SF3A3-204ENST00000462258 PTPN13Q12923 2485 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 IGLV3-12A0A075B6K2 115 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 A0A0A6YYC8 382 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-204ENST00000462258 NPEPPSL1A6NEC2 478 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 I3L1I5 382 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-204ENST00000462258 MAP2K7O14733 419 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 GUCA1CO95843 209 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 CDH1P12830 882 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 ACPPP15309 386 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 CD97P48960 835 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 ETF1P62495 437 aaKnown RBP9.67□□□□□ -0.86
SF3A3-204ENST00000462258 CSNK1G2P78368 415 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 NDUFA9Q16795 377 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 PPP1R3AQ16821 1122 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 VWA2Q5GFL6 755 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 JMJD6Q6NYC1 403 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-204ENST00000462258 KIRREL2Q6UWL6 708 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 SBSNQ6UWP8 590 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 SYT10Q6XYQ8 523 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 ATCAYQ86WG3 371 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 EFCAB3Q8N7B9 438 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 RBMXL3Q8N7X1 1067 aaKnown RBP9.67□□□□□ -0.86
SF3A3-204ENST00000462258 AMER3Q8N944 861 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 CPT1CQ8TCG5 803 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 PYROXD1Q8WU10 500 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 CDKL2Q92772 493 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 PNPLA2Q96AD5 504 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 PYCR2Q96C36 320 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 FBXL8Q96CD0 374 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 MMABQ96EY8 250 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-204ENST00000462258 VPS39Q96JC1 886 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 YIPF2Q9BWQ6 316 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 TRIM54Q9BYV2 358 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 RHOJQ9H4E5 214 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 MKKSQ9NPJ1 570 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-204ENST00000462258 ATP13A2Q9NQ11 1180 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 MOCS1Q9NZB8 636 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 GRHL1Q9NZI5 618 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 C5AR2Q9P296 337 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 C3orf18Q9UK00 162 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 IKZF3Q9UKT9 509 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 MRPS2Q9Y399 296 aaKnown RBP9.67□□□□□ -0.86
SF3A3-204ENST00000462258 CPAMD8Q8IZJ3 1885 aa9.67□□□□□ -0.86
SF3A3-204ENST00000462258 FEZF1A0PJY2 475 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 IDSB3KWA1 339 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 EIF3HO15372 352 aaKnown RBP eCLIP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 FOXS1O43638 330 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 IPO13O94829 963 aaKnown RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 SLC35G6P0C7Q6 338 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 SSTR1P30872 391 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 GRK3P35626 688 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 SLC26A3P40879 764 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 BCL6P41182 706 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 AVPR1BP47901 424 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 SOX8P57073 446 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 TAS2R39P59534 338 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 MAT1AQ00266 395 aaKnown RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 CBLBQ13191 982 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 FAM53BQ14153 422 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 SYT16Q17RD7 645 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 PRR30Q53SZ7 412 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 IRAK1BP1Q5VVH5 260 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 DUPD1Q68J44 220 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 TMEM207Q6UWW9 146 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 FRA10AC1Q70Z53 315 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 ASPGQ86U10 573 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 ZC3H7AQ8IWR0 971 aaKnown RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 NKAPQ8N5F7 415 aaKnown RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 Q8NA96 180 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 OR11G2Q8NGC1 345 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 OR56A3Q8NH54 315 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 ZCCHC10Q8TBK6 192 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms