RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 TRIM31Q9BZY9 425 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 TGIF2Q9GZN2 237 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 SOX17Q9H6I2 414 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-210ENST00000462125 CUEDC1Q9NWM3 386 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-210ENST00000462125 PLAAQ9Y263 795 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 MAP4K5Q9Y4K4 846 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 HEATR5BQ9P2D3 2071 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 TTLL8A6PVC2 850 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 MASP2O00187 686 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 HAT1O14929 419 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 ERLIN1O75477 346 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 IPO13O94829 963 aaKnown RBP12.57□□□□□ -0.4
C9orf3-210ENST00000462125 H2AFXP16104 143 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-210ENST00000462125 CCND1P24385 295 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 AP1S2P56377 157 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 TBPL1P62380 186 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 CSNK1G2P78368 415 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 KLC1Q07866 573 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 PDAP1Q13442 181 aaKnown RBP12.57□□□□□ -0.4
C9orf3-210ENST00000462125 NAE1Q13564 534 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 DSG2Q14126 1118 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 FASTKD3Q14CZ7 662 aaKnown RBP12.57□□□□□ -0.4
C9orf3-210ENST00000462125 VWA2Q5GFL6 755 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 PRAMEF13Q5VWM6 474 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 LCTLQ6UWM7 567 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 TMEM207Q6UWW9 146 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 SHISA6Q6ZSJ9 500 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 CYS1Q717R9 158 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 MAATS1Q7Z4T9 603 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 LAPTM4BQ86VI4 370 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 SLC26A11Q86WA9 606 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 ZC3HC1Q86WB0 502 aaKnown RBP12.57□□□□□ -0.4
C9orf3-210ENST00000462125 PLD3Q8IV08 490 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 GPATCH11Q8N954 259 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 Q8NA96 180 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 OR11G2Q8NGC1 345 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 OR56A3Q8NH54 315 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 PNPLA2Q96AD5 504 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 MIEF2Q96C03 454 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 TM4SF19Q96DZ7 209 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 VPS50Q96JG6 964 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 MCMBPQ9BTE3 642 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 SARGQ9BW04 601 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 ATG10Q9H0Y0 220 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 ABCF3Q9NUQ8 709 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 WHRNQ9P202 907 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 FBXL4Q9UKA2 621 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 PSAT1Q9Y617 370 aa12.57□□□□□ -0.4
C9orf3-210ENST00000462125 TNRC6AQ8NDV7 1962 aaKnown RBP12.57□□□□□ -0.4
C9orf3-210ENST00000462125 RELNP78509 3460 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 A0A1W2PQ72 361 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 CLEC18AA5D8T8 446 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 PRPF4O43172 522 aaKnown RBP eCLIP12.56□□□□□ -0.42e-7■■■■□ 25.5
C9orf3-210ENST00000462125 ATP8B1O43520 1251 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 ALPPP05187 535 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 ENO2P09104 434 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-210ENST00000462125 FBLP22087 321 aaKnown RBP12.56□□□□□ -0.4
C9orf3-210ENST00000462125 PGGT1BP53609 377 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 RPS15AP62244 130 aaKnown RBP12.56□□□□□ -0.4
C9orf3-210ENST00000462125 ILF2Q12905 390 aaKnown RBP12.56□□□□□ -0.4
C9orf3-210ENST00000462125 RAPSNQ13702 412 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 DUPD1Q68J44 220 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 SLC6A19Q695T7 634 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 CAPN13Q6MZZ7 669 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-210ENST00000462125 IGFL2Q6UWQ7 119 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 CLEC18BQ6UXF7 455 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 MBOAT1Q6ZNC8 495 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 VN1R4Q7Z5H5 301 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 ADCK2Q7Z695 626 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 STRA8Q7Z7C7 330 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 AMER3Q8N944 861 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 CLEC18CQ8NCF0 446 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 ABHD11Q8NFV4 315 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 OR4K1Q8NGD4 311 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 HAUS8Q9BT25 410 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 CRB3Q9BUF7 120 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 TRIM54Q9BYV2 358 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 FAM129AQ9BZQ8 928 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 DRC3Q9H069 523 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 NSMCE4AQ9NXX6 385 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 ZFATQ9P243 1243 aa12.56□□□□□ -0.4
C9orf3-210ENST00000462125 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.56□□□□□ -0.4
C9orf3-210ENST00000462125 NOVA2Q9UNW9 492 aaKnown RBP12.56□□□□□ -0.4
C9orf3-210ENST00000462125 V9GYY5 206 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-210ENST00000462125 SPENQ96T58 3664 aaKnown RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 A0A0A6YYC8 382 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 CCDC151A5D8V7 595 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 H0YIG0 161 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 I3L1I5 382 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 PCDH17O14917 1159 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 EIF3HO15372 352 aaKnown RBP eCLIP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 P2RX6O15547 441 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 RRP9O43818 475 aaKnown RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 LCMT2O60294 686 aaKnown RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 EMP2P54851 167 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 SNRPNP63162 240 aaKnown RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 RBBP7Q16576 425 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 NDUFA9Q16795 377 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 TUBB8Q3ZCM7 444 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms