RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ADORA3P0DMS8 318 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 BPIP17213 487 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 PTPN2P17706 415 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 MAPK1P28482 360 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 GKP32189 559 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 GGT2P36268 569 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 CSNK2BP67870 215 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 CYP4F2P78329 520 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.85■□□□□ 0.45
HPS3-204ENST00000462030 MACC1Q6ZN28 852 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 CHST9Q7L1S5 443 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 MYDGFQ969H8 173 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 EPYCQ99645 322 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 PCDHGA3Q9Y5H0 932 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 A3GALT2U3KPV4 340 aa17.85■□□□□ 0.45
HPS3-204ENST00000462030 CLCA1A8K7I4 914 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 M0R129 80 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 PRPH2P23942 346 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 COPZ1P61923 177 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 SEMG2Q02383 582 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 GPR17Q13304 367 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 SF1Q15637 639 aaKnown RBP17.84■□□□□ 0.45
HPS3-204ENST00000462030 NEK5Q6P3R8 708 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 MSANTD1Q6ZTZ1 278 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 TSEN54Q7Z6J9 526 aaKnown RBP17.84■□□□□ 0.45
HPS3-204ENST00000462030 SYT12Q8IV01 421 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 FAM9CQ8IZT9 166 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 PSD4Q8NDX1 1056 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 KBTBD8Q8NFY9 601 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 MAL2Q969L2 176 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 FEVQ99581 238 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 RETREG1Q9H6L5 497 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 RUBCNLQ9H714 662 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 FKBP14Q9NWM8 211 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 CCDC59Q9P031 241 aaKnown RBP17.84■□□□□ 0.45
HPS3-204ENST00000462030 PCDHGB6Q9Y5F9 930 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 GLYATL1P3A0A0U1RQE8 302 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 IDH2P48735 452 aaKnown RBP17.84■□□□□ 0.45
HPS3-204ENST00000462030 ZSWIM9Q86XI8 627 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 SYNPOQ8N3V7 929 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 PLCXD1Q9NUJ7 323 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 FBXL12Q9NXK8 326 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 TAS2R16Q9NYV7 291 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 HCSTQ9UBK5 93 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 SPASTQ9UBP0 616 aa17.84■□□□□ 0.45
HPS3-204ENST00000462030 ZNF106Q9H2Y7 1883 aaKnown RBP17.84■□□□□ 0.45
HPS3-204ENST00000462030 TMEM229AB2RXF0 380 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 GFRA2O00451 464 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 COX7A2P14406 83 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 TNFRSF1BP20333 461 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 BOP1Q14137 746 aaKnown RBP17.83■□□□□ 0.45
HPS3-204ENST00000462030 GGTA1PQ4G0N0 100 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 ARMCX4Q5H9R4 360 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 RSBN1Q5VWQ0 802 aaPredicted RBP17.83■□□□□ 0.45
HPS3-204ENST00000462030 MMAAQ8IVH4 418 aaKnown RBP17.83■□□□□ 0.45
HPS3-204ENST00000462030 PAF1Q8N7H5 531 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 YME1L1Q96TA2 773 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 EMILIN2Q9BXX0 1053 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 MOV10Q9HCE1 1003 aaKnown RBP17.83■□□□□ 0.45
HPS3-204ENST00000462030 RLIMQ9NVW2 624 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 BTBD3Q9Y2F9 522 aa17.83■□□□□ 0.45
HPS3-204ENST00000462030 MN1Q10571 1320 aaPredicted RBP17.83■□□□□ 0.44
HPS3-204ENST00000462030 MED26O95402 600 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 ASGR1P07306 291 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 HSMCR30P0CW71 290 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 PRPS1L1P21108 318 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 NDUFA5Q16718 116 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 PTCHD3Q3KNS1 767 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 RTP2Q5QGT7 225 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 UBE2R2Q712K3 238 aaPredicted RBP17.83■□□□□ 0.44
HPS3-204ENST00000462030 IL17RDQ8NFM7 739 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 HTATIP2Q9BUP3 242 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 TPT1P8Q9HAU6 139 aa17.83■□□□□ 0.44
HPS3-204ENST00000462030 CCNKO75909 580 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 ITPKAP23677 461 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 HNF1BP35680 557 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 LIMK1P53667 647 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 UGT2B15P54855 530 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 ADGRF1Q5T601 910 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 LRRC70Q7Z2Q7 622 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 NXPE1Q8N323 547 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 CPA6Q8N4T0 437 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 SLC5A8Q8N695 610 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 SH3KBP1Q96B97 665 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 SDHCQ99643 169 aaPredicted RBP17.82■□□□□ 0.44
HPS3-204ENST00000462030 CWH43Q9H720 699 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 MARCH7Q9H992 704 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 ZNF226Q9NYT6 803 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 EHD3Q9NZN3 535 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 PCDHGB3Q9Y5G1 929 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 LYVE1Q9Y5Y7 322 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 TRBC1P01850 177 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 LAMP1P11279 417 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 CCR7P32248 378 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 RGS6P49758 472 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 TP53BP2Q13625 1128 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 MLIPQ5VWP3 458 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 FRG2Q64ET8 278 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 THOC7Q6I9Y2 204 aaKnown RBP17.82■□□□□ 0.44
HPS3-204ENST00000462030 SLC24A5Q71RS6 500 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms