RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 UTP6Q9NYH9 597 aaKnown RBP16.61■□□□□ 0.25
MRPL28-207ENST00000461550 IKZF3Q9UKT9 509 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 VWA7Q9Y334 891 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 HS3ST3B1Q9Y662 390 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 PTPN13Q12923 2485 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 LRRK2Q5S007 2527 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 VSTM2BA6NLU5 285 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 TTLL8A6PVC2 850 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 E7ESA3 106 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 AGPSO00116 658 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 SOCS6O14544 535 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 FBLP22087 321 aaKnown RBP16.61■□□□□ 0.25
MRPL28-207ENST00000461550 KLC1Q07866 573 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 VWA2Q5GFL6 755 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 FAM45BPQ6NSW5 357 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 PRMT9Q6P2P2 845 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 GALNT16Q8N428 558 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 FAM45AQ8TCE6 357 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 STT3BQ8TCJ2 826 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 IFT81Q8WYA0 676 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 MACROD1Q9BQ69 325 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 CRB3Q9BUF7 120 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 YIPF2Q9BWQ6 316 aa16.61■□□□□ 0.25
MRPL28-207ENST00000461550 MRPS2Q9Y399 296 aaKnown RBP16.61■□□□□ 0.25
MRPL28-207ENST00000461550 SCN3AQ9NY46 2000 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 FEZF1A0PJY2 475 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 SLC16A5O15375 505 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 CD97P48960 835 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 CAV1Q03135 178 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 OCA2Q04671 838 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 ZNF460Q14592 562 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 RBBP7Q16576 425 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 SYT16Q17RD7 645 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 ZXDCQ2QGD7 858 aaPredicted RBP16.6■□□□□ 0.25
MRPL28-207ENST00000461550 TEX35Q5T0J7 233 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 VWA5B1Q5TIE3 1220 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 KIRREL2Q6UWL6 708 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 TMEM207Q6UWW9 146 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 STRA8Q7Z7C7 330 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 ZC3HC1Q86WB0 502 aaKnown RBP16.6■□□□□ 0.25
MRPL28-207ENST00000461550 CCDC25Q86WR0 208 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 ARHGEF39Q8N4T4 335 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 RBMXL3Q8N7X1 1067 aaKnown RBP16.6■□□□□ 0.25
MRPL28-207ENST00000461550 MIB2Q96AX9 1013 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 PYCR2Q96C36 320 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 SMAD5Q99717 465 aaKnown RBP16.6■□□□□ 0.25
MRPL28-207ENST00000461550 SAYSD1Q9NPB0 183 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 SMYD2Q9NRG4 433 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 ARL15Q9NXU5 204 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 MOCS1Q9NZB8 636 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 TRPC4Q9UBN4 977 aa16.6■□□□□ 0.25
MRPL28-207ENST00000461550 ZNF282Q9UDV7 671 aaPredicted RBP16.6■□□□□ 0.25
MRPL28-207ENST00000461550 NXT1Q9UKK6 140 aaKnown RBP16.6■□□□□ 0.25
MRPL28-207ENST00000461550 CORO1CQ9ULV4 474 aaPredicted RBP16.6■□□□□ 0.25
MRPL28-207ENST00000461550 A0A0A6YYC8 382 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-207ENST00000461550 I3L1I5 382 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-207ENST00000461550 SLU7O95391 586 aaKnown RBP16.59■□□□□ 0.25
MRPL28-207ENST00000461550 GUCA1CO95843 209 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 ZGLP1P0C6A0 271 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 CDH1P12830 882 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 CSNK1G2P78368 415 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 FRG1Q14331 258 aaKnown RBP16.59■□□□□ 0.25
MRPL28-207ENST00000461550 MYBPC3Q14896 1274 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 PRR30Q53SZ7 412 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-207ENST00000461550 JMJD6Q6NYC1 403 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-207ENST00000461550 VN1R4Q7Z5H5 301 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 LAPTM4BQ86VI4 370 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 C17orf64Q86WR6 236 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 AMER3Q8N944 861 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 MIEF2Q96C03 454 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 C8orf44Q96CB5 159 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 MMABQ96EY8 250 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-207ENST00000461550 TMEM184CQ9NVA4 438 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 C3orf18Q9UK00 162 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 PCDHGB7Q9Y5F8 929 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 SHANK1Q9Y566 2161 aa16.59■□□□□ 0.25
MRPL28-207ENST00000461550 DOPEY2Q9Y3R5 2298 aa16.58■□□□□ 0.25
MRPL28-207ENST00000461550 CNTRLQ7Z7A1 2325 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 FAM95CA0A1B0GW59 222 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 FOXS1O43638 330 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 DPM1O60762 260 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 IGHEP01854 428 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 HIST1H2AGP0C0S8 130 aaPredicted RBP16.58■□□□□ 0.24
MRPL28-207ENST00000461550 HIST1H2ADP20671 130 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 ITGA3P26006 1051 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 MAT1AQ00266 395 aaKnown RBP16.58■□□□□ 0.24
MRPL28-207ENST00000461550 DSG2Q14126 1118 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 SLC6A19Q695T7 634 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 SHISA5Q8N114 240 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 OR11G2Q8NGC1 345 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 HIST1H2AHQ96KK5 128 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 HIST1H2AJQ99878 128 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 H2AFJQ9BTM1 129 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 SGPP1Q9BX95 441 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 DRC3Q9H069 523 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 ZNF552Q9H707 407 aaPredicted RBP16.58■□□□□ 0.24
MRPL28-207ENST00000461550 ZBTB20Q9HC78 741 aaPredicted RBP16.58■□□□□ 0.24
MRPL28-207ENST00000461550 ATP13A2Q9NQ11 1180 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 SEMA3GQ9NS98 782 aa16.58■□□□□ 0.24
MRPL28-207ENST00000461550 ZDHHC18Q9NUE0 388 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms