RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SCMH1Q96GD3 660 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 SIGLEC12Q96PQ1 595 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 TTC1Q99614 292 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 ZFYVE21Q9BQ24 234 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 TRIM51Q9BSJ1 452 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 TSSK1BQ9BXA7 367 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 MKL2Q9ULH7 1088 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 AKAP6Q13023 2319 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 ZNF469Q96JG9 3925 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-202ENST00000461127 TCRBV7S2A1N4TA0A589 114 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 CTAGE15A4D2H0 777 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 ADAM10O14672 748 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 SUN1O94901 812 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 SLCO2B1O94956 709 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 CTAGE8P0CG41 777 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 SLC26A3P40879 764 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 MYBPHQ13203 477 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 MEP1AQ16819 746 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 ANKRD20A2Q5SQ80 823 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 ANKRD20A1Q5TYW2 823 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 ANKRD20A3Q5VUR7 823 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 PLAG1Q6DJT9 500 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 TMEM211Q6ICI0 200 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 DENND5AQ6IQ26 1287 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 CTAGE6Q86UF2 777 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 SIAH3Q8IW03 269 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 CTAGE4Q8IX94 777 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 DMRTC2Q8IXT2 367 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-202ENST00000461127 MIPEPQ99797 713 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 CARD6Q9BX69 1037 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 HES7Q9BYE0 225 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 KCNK13Q9HB14 408 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 KCNJ16Q9NPI9 418 aa16.29■□□□□ 0.2
TOP3A-202ENST00000461127 C19orf25Q9UFG5 118 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-202ENST00000461127 HCFC1P51610 2035 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 VPS26AO75436 327 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 SEC24DO94855 1032 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-202ENST00000461127 FOSL1P15407 271 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 ZNF24P17028 368 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 CD96P40200 585 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 HSF1Q00613 529 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 OC90Q02509 493 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-202ENST00000461127 KLF1Q13351 362 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-202ENST00000461127 GRB7Q14451 532 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 SPARCL1Q14515 664 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 PRTGQ2VWP7 1150 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 FCRLBQ6BAA4 426 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 H3F3CQ6NXT2 135 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 MICALCLQ6ZW33 695 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 GALNTL5Q7Z4T8 443 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-202ENST00000461127 AMER3Q8N944 861 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 OR2L3Q8NG85 312 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 GSDMBQ8TAX9 411 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 RAD51AP1Q96B01 352 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 HOMER3Q9NSC5 361 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 CCM2LQ9NUG4 571 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-202ENST00000461127 ANKRD10Q9NXR5 420 aa16.28■□□□□ 0.2
TOP3A-202ENST00000461127 DNHD1Q96M86 4753 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 FAM90A27PA6NNH2 459 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 H0YGG7 62 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 CCDC188H7C350 402 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 APOC4-APOC2K7ER74 178 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 ZNHIT1O43257 154 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 APOC2P02655 101 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 APOA4P06727 396 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 PSMB5P28074 263 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 MSX1P28360 303 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 CHRNB4P30926 498 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 CCR7P32248 378 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 ARF3P61204 181 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-202ENST00000461127 GARNL3Q5VVW2 1013 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 SPINK14Q6IE38 97 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 CEP128Q6ZU80 1094 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 ZNF572Q7Z3I7 529 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-202ENST00000461127 CPEB2Q7Z5Q1 589 aaKnown RBP16.27■□□□□ 0.2
TOP3A-202ENST00000461127 VRK3Q8IV63 474 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 CSNK1A1LQ8N752 337 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 SPATA4Q8NEY3 305 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 LILRB4Q8NHJ6 448 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 C1orf54Q8WWF1 131 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 NRGNQ92686 78 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 FRMD8P1Q9BZ68 369 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-202ENST00000461127 DRC3Q9H069 523 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 GSX1Q9H4S2 264 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-202ENST00000461127 C10orf88Q9H8K7 445 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 NPDC1Q9NQX5 325 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-202ENST00000461127 EDARQ9UNE0 448 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 ASB1Q9Y576 335 aa16.27■□□□□ 0.2
TOP3A-202ENST00000461127 PHF2O75151 1096 aa16.26■□□□□ 0.19
TOP3A-202ENST00000461127 GPC4O75487 556 aa16.26■□□□□ 0.19
TOP3A-202ENST00000461127 SLU7O95391 586 aaKnown RBP16.26■□□□□ 0.19
TOP3A-202ENST00000461127 SP1P08047 785 aa16.26■□□□□ 0.19
TOP3A-202ENST00000461127 CYC1P08574 325 aa16.26■□□□□ 0.19
TOP3A-202ENST00000461127 HOXD4P09016 255 aaPredicted RBP16.26■□□□□ 0.19
TOP3A-202ENST00000461127 CMPK1P30085 196 aa16.26■□□□□ 0.19
TOP3A-202ENST00000461127 C2orf54Q08AI8 447 aa16.26■□□□□ 0.19
TOP3A-202ENST00000461127 FOXD4Q12950 439 aaPredicted RBP16.26■□□□□ 0.19
TOP3A-202ENST00000461127 FASTKQ14296 549 aaKnown RBP16.26■□□□□ 0.19
TOP3A-202ENST00000461127 POU6F1Q14863 301 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms